Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0648 ATGAAGATATATTCTAAGATTATAACTCCATATAACTTCACAAATCCCATTCATGAGTTTGTTAGAAAGAGTACTCCTATACCTAAAGAGGATCACTTATCTACTAATCCAAACAGGGTCTTAAGCTTCGCCGTTTCTTATTCAACCGTGAATCACGGCGGAGGAGCCATGGGAGACGGCTCCAGCAACCGCACGAACATTAACACCAACAAACCGGAGTGGTTGCAACATTACGATCTTATAGGGAAGATCGGAGAAGGAACCTATGGTCTCGTCTTCCTCGCTCGCATCAAATCTCAAACCAATCGCGGCAAATCCATCGCTATCAAGAAATTCAAGCAATCCAAAGATGGCGATGGTGTTTCCCCAACCGCGATTCGTGAAATTATGTTGCTGAGGGAGATAACTCATGAGAATGTTGTGAAGCTTGTGAATGTTCACATCAATCACGTAGACATGTCTCTGTATCTGGCTTTCGATTACGCTGAACATGACCTTTATGAAATAATTAGACATCACAGAGACAAAGTCAATCATTCTATTAATCCGTACACTGTAAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCATAGTAATTGGATAATACATCGAGACTTAAAGCCATCGAATATATTGGTTATGGGTGATGGGGAGGAACATGGGGTTGTTAAAATTGCCGACTTTGGACTTGCAAGGATTTATCAAGCCCCATTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATCTGGTATCGTGCACCTGAGTTGCTTCTCGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGGTGCATTTTTGCTGAGTTGTTGACCTTGAAGCCCTTATTTCAAGGTGCAGAAGTCAAAGCTCCACCAAATCCTTTTCAGCTTGATCAACTTGACAAAATATTCAAGGTTTTAGGCCATCCAACATTAGAAAAGTGGACTTCATTAGCAAATCTTCCCCATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGACAACACCAGTCTCTGTAATGTTGTACACTTGTCTCCAAAAAGTCCGGCATATGAACTCTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATAACAGCCACACAAGCTTTGGAGCATGAGTATTTCAGAATGGAACCACAACCTGGTCGGAATACACTTGTACCTTGCCAACCTGGAGAGACATTTGTGAATTATCCCACACGTCCAGTGGACACAACAACAGATTTTGAAGGGACAGCCAACTTGCAACCTCCACAGCCGGTTTCGTCTGGGGCAGGCAGCATACCAGGTGGTCATTTGTCAAATAGATCTGTCCCTCGGCAAATGAATGTAGCTGGGATGCAAAGAATGCCTCATCAGGCAATGCAGGCTTATAATCTCGCATCTCAGGGAGGGATTGGTCCTGGAATGAATCCTGGTGGAATCCCAATGCAACGGGGTGTTCCACAGGCCCATCCACAGCAACAGTTGAGAAGAAAAGAACAAATGGGAATGCCAGGATACCCTCCACAGCAGAGGTCAAGACATTGTTTTGGTAGAGATCAGATGAAGCTAGATTCGAAGTTCGATACAACTGAACTCGAGCTCATTGAGGACAATTCATGA 1644 0.4325 MKIYSKIITPYNFTNPIHEFVRKSTPIPKEDHLSTNPNRVLSFAVSYSTVNHGGGAMGDGSSNRTNINTNKPEWLQHYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHVDMSLYLAFDYAEHDLYEIIRHHRDKVNHSINPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKAPPNPFQLDQLDKIFKVLGHPTLEKWTSLANLPHWQQDVQHIQGHKYDNTSLCNVVHLSPKSPAYELLSKMLEYDPRKRITATQALEHEYFRMEPQPGRNTLVPCQPGETFVNYPTRPVDTTTDFEGTANLQPPQPVSSGAGSIPGGHLSNRSVPRQMNVAGMQRMPHQAMQAYNLASQGGIGPGMNPGGIPMQRGVPQAHPQQQLRRKEQMGMPGYPPQQRSRHCFGRDQMKLDSKFDTTELELIEDNS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0648 547 PANTHER CELL DIVISION PROTEIN KINASE 67 521 - -
Lal4g0648 547 MobiDBLite consensus disorder prediction 422 450 - -
Lal4g0648 547 SMART serkin_6 78 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0648 547 Pfam Protein kinase domain 78 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0648 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lal4g0648 547 MobiDBLite consensus disorder prediction 479 522 - -
Lal4g0648 547 ProSiteProfiles Protein kinase domain profile. 78 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0648 547 PANTHER CYCLIN-DEPENDENT KINASE E-1 67 521 - -
Lal4g0648 547 SUPERFAMILY Protein kinase-like (PK-like) 72 390 IPR011009 -
Lal4g0648 547 CDD STKc_CDK8_like 78 388 - -
Lal4g0648 547 Gene3D Phosphorylase Kinase; domain 1 61 161 - -
Lal4g0648 547 ProSitePatterns Protein kinases ATP-binding region signature. 84 111 IPR017441 GO:0005524
Lal4g0648 547 Gene3D Transferase(Phosphotransferase) domain 1 162 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0648 Lal-Chr4 4862062 4872196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0648 57 521 Core Cell Cycle Gene Families AT5G63610 75.264 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Lal4g0648 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0648 K02208 - gmx:100813433 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0648 4 4862062 4872196 Lal4g0648 4 4862062 4872196 ECH