Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0637 ATGGAAGATGAGAGCTGCTTAAAGACGATGAACAACAACAACATGAAAGAACAAGATCACTTTCTCCCTATAGCAAATGTGGGTAGGATCATGAAAAAGGGTATTCCTGGAAATGGAAAAATCTCAAAGGATGCAAAAGAATCAGTTCAAGAATATGTATCTGAGTTCATAAGCTTTATCACTGGTGAAGCATCAGATAAATGTCAAAGAGAAAATAGAAAGACCATTAATGGAGATGATATCATATGGGCCATTACAACTTTAGGGTTTGAAAATTATGTGGAGCCCTTAAAATTCTATCTCCACAAATATAGAGAGATTGAAGGTGAGAAGCTTAATATTCCAAAGCAGCAGCAGCAACAACAACAATATCAAATTAATAATGTATATTCCATTCATCACCCTCCATATGTTGCTACAGACCAACTATTTTCACTACCATTTTCCTCAAATTCAATTCAGAAACCATTGCAATCTCAAGATCAGATTGATTCTATGGGGCAATGGTAA 510 0.351 MEDESCLKTMNNNNMKEQDHFLPIANVGRIMKKGIPGNGKISKDAKESVQEYVSEFISFITGEASDKCQRENRKTINGDDIIWAITTLGFENYVEPLKFYLHKYREIEGEKLNIPKQQQQQQQYQINNVYSIHHPPYVATDQLFSLPFSSNSIQKPLQSQDQIDSMGQW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0637 169 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 9 157 - -
Lal4g0637 169 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 9 157 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lal4g0637 169 SUPERFAMILY Histone-fold 18 121 IPR009072 GO:0046982
Lal4g0637 169 Gene3D Histone, subunit A 8 131 IPR009072 GO:0046982
Lal4g0637 169 PRINTS CCAAT-binding transcription factor subunit A signature 49 67 - -
Lal4g0637 169 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Lal4g0637 169 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Lal4g0637 169 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 85 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0637 Lal-Chr4 4742876 4743385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0637 16 166 CCAAT-HAP3 Transcription Factor Family AT2G13570 61.453 3.22e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal4g0637 CBFD_NFYB_HMF 1.6e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0637 K08065 - tcc:18611900 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0637 4 4742876 4743385 Lal4g0637 4 4742876 4743385 ECH