Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0633 ATGAGAAGTGTTGAAGTAAAACAAGATTACAACATTGTTTGTTTGAAGAAGATCTTGACTCGTAAATCTGTTTGTAATAATAATAATAATAACCAGAAGCATTTTGTAACAATTTTGAATCTAGAAACCTTGTTATTGGTACACACGGTTCATCATCTCCGATTTCTTATTCTTACATTGAATGCGATGGAATCAAGTTCAACACAGGAATTCGATTATTTGTTCAAGTTACTCATGATTGGAGACTCTGGCGTTGGAAAGAGTAGTCTCCTCCTTTGTTTCACTTCCGATAGCTTCGAAGATCTCTCTCCCACTATTGGTGTTGATTTTAAGGTTAAATATGTCACGATGGATGGTAAAAAGCTGAAGCTTGCCATTTGGGATACAGCTGGCCAGGAGAGATTCAGAACATTGACAAGCTCTTATTACCGAGGGGCACAAGGGATCATTATGATTTATGATGTAACACGGCGAGAAACATTTACAAATCTCTCTGAAATATGGGCAAGGGAAATAGACCTTTATTCAACAAATCAAGACTGCATTAGGATGCTTGTTGGAAACAAAGTGGATAAGGAGGGTGATAGAGTTGTGACCAAGAAAGAGGGAATAGACTTCGCCAGGGAATGCGGTTGCCTGTTTATTGAATGCAGTGCTAAAACTCGTGTTAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGATTCTCGATACACCTAGCCTTTTAGCCGAGGGCTCCAAGGGAGTTAAAAAGAACATATTTAAAGACAAGCCACTCCAGTCTGCTGCTACAAGTAGTTGTTGCTGA 810 0.3889 MRSVEVKQDYNIVCLKKILTRKSVCNNNNNNQKHFVTILNLETLLLVHTVHHLRFLILTLNAMESSSTQEFDYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYVTMDGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMIYDVTRRETFTNLSEIWAREIDLYSTNQDCIRMLVGNKVDKEGDRVVTKKEGIDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGVKKNIFKDKPLQSAATSSCC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0633 269 ProSiteProfiles small GTPase Ras family profile. 65 269 IPR001806 GO:0003924|GO:0005525
Lal4g0633 269 Gene3D - 67 269 IPR027417 -
Lal4g0633 269 SMART ran_sub_2 80 269 - -
Lal4g0633 269 ProSiteProfiles small GTPase Rho family profile. 68 237 - -
Lal4g0633 269 SMART arf_sub_2 63 240 - -
Lal4g0633 269 CDD Rab18 75 236 - -
Lal4g0633 269 PANTHER SMALL GTPASE FAMILY RAB PROTEIN 63 269 - -
Lal4g0633 269 SMART rab_sub_5 75 239 - -
Lal4g0633 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 242 IPR027417 -
Lal4g0633 269 Pfam Ras family 76 237 IPR001806 GO:0003924|GO:0005525
Lal4g0633 269 SMART ras_sub_4 72 239 - -
Lal4g0633 269 TIGRFAM small_GTP: small GTP-binding protein domain 73 231 IPR005225 GO:0005525
Lal4g0633 269 PRINTS Transforming protein P21 ras signature 75 96 - -
Lal4g0633 269 PRINTS Transforming protein P21 ras signature 97 113 - -
Lal4g0633 269 PRINTS Transforming protein P21 ras signature 115 137 - -
Lal4g0633 269 PRINTS Transforming protein P21 ras signature 179 192 - -
Lal4g0633 269 PRINTS Transforming protein P21 ras signature 214 236 - -
Lal4g0633 269 PANTHER DRAB5-RELATED 63 269 - -
Lal4g0633 269 SMART rho_sub_3 77 239 IPR001806 GO:0003924|GO:0005525
Lal4g0633 269 ProSiteProfiles small GTPase Rab1 family profile. 70 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0633 Lal-Chr4 4697959 4702031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0633 76 229 EF-hand Containing Proteins AT5G27540 26.875 1.34e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0633 K07910 - gmx:100779729 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1376 14 15146358 15161194 Lal4g0633 4 4697959 4702031 PCT
Lal7g0821 7 14907413 14913214 Lal4g0633 4 4697959 4702031 PCT
Lal4g0633 4 4697959 4702031 Lal14g1376 14 15146358 15161194 PCT
Lal4g0633 4 4697959 4702031 Lal7g0821 7 14907413 14913214 PCT