Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0630 ATGAATATCCCTTCCCTCATTCGCTACTCTAATATTCTGGTTGCTCCTCTCTATTCTACGGCTCCCGCCACCACCACCACCACCACCACCACCACCGTCAGGTGCACTAGAGCAGAGAATATTGCAATTGAAGGTTGTAACCTCAATTTTTCATTCACCACAAACCAAGCAAACGCTGTGCCAGTGCCAATTCTTAAGGATTGTTCGCTTCGCATTCCTTCGGGGCAGTTATGGATGCTTCTTGGTCCCAATGGGTGTGGAAAATCTACCCTCTTGAAAATTTTGGCTGGTCTTTTGAATCCAACTTCAGGAACAATGTTTGTGAATAAGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTGATGCCTACAGTAGATTCTGATGTTGCATTTGGTCTTGGTAAGTTCAATCTGACTAATGATGAAGTCATATCTCGGGTGTCAAACGCTTTGCATGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAACAGAGGGTAGCCATTGCTGGTGCTCTAGCAGAAGCATGTAAAGTTTTGTTGTTGGATGAGCTGACAACATTCTTAGATGAAACTGACCAGGTGGCTGTTCTGAAAGCTGTTAGGAACTCTTTGGATACCTCTGCAGAAGTTACAGCATTATGGGTTACCCATCGTTTAGAAGAACTAGAATATGCAGATGGTGCCATTTACATGGAGGATGGAAAAGTTGTCATGCATGGAGATGTAGCAAGCATAAGGAGTTTCATTGAAGATAAACAATCCATCTATATTAAACAAATTAATTCTTAA 825 0.4255 MNIPSLIRYSNILVAPLYSTAPATTTTTTTTTVRCTRAENIAIEGCNLNFSFTTNQANAVPVPILKDCSLRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTMFVNKPKSFVFQNPDHQVVMPTVDSDVAFGLGKFNLTNDEVISRVSNALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVAVLKAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDVASIRSFIEDKQSIYIKQINS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0630 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 261 IPR027417 -
Lal4g0630 274 Pfam ABC transporter 65 197 IPR003439 GO:0005524
Lal4g0630 274 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Lal4g0630 274 Gene3D - 40 273 IPR027417 -
Lal4g0630 274 SMART AAA_5 74 247 IPR003593 -
Lal4g0630 274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 270 IPR003439 GO:0005524
Lal4g0630 274 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 34 273 - -
Lal4g0630 274 CDD ABC_cobalt_CbiO_domain1 49 247 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lal4g0630 274 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 34 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0630 Lal-Chr4 4681821 4684698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0630 43 273 Calmodulin-binding Proteins AT2G36910 28.571 1.38e-15 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0630 4 4681821 4684698 Lal4g0630 4 4681821 4684698 ECH