Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0614 ATGCTGGAAAACTCAACTTTACCGGAAGAAAATCTCAATCACATGGAGAACAACAACCTTCAGCAGCAGGTAAGAGAAACTGACACCAGTGGTGGTTGGCCAGTAGTCTCAGTCTCCGATGGGTTCAAACCGGAGGAGGAGCACGGTGGAGAAGAAGACGGTGACCGCAATTCCACCGTCAACCGCTGGCCTCGTGAGGAAACAATGGCCTTGCTCAAGATAAGGTCTGAAATGGACACTGCTTTCAGAGATATCAGCCCTAAAGCCCCTCTTTGGGAACAAGTCTCTAGGAAATTATTGGAGCTAGGATATCATAGGAATGGTAAGAAGTGCAAAGAGAAGTTTGAGAATATTTACAAGTACCATAGGAGGACCAAGGAAGGTCGTTTTGGAAAATCTAATGGCAAGACTTATAGATTTTTTGAGCAATTGGAAGCTTTAGATAATAACCCACTTCCTCCTCATTCTTCTTTATTAGATGGACAAGTTGGAAAAGTAACAGAAGCTTATGTAGTACCCAACGATGTTATCAAAGATGCAGTTCCTTGTTCAATTAGGTTCCCGAATGGAAACATGGTCAACGTTGACCATAATAACTCCAGTTCAACCAGTTCCTCTGGAGGGTCAAGGGAAGGGAAAAAGAAGAGGTTGACTCAGTTTTTTGAGGGGATGATGAGGGAAGTGATTGAGAACCAAGAAAGGTTGCAGAGGAAGTTGATGGAGGTGTTGGACAAGTGTGAGAAGGAACGAAAGGTGCGAGAGGAAGCATGGAAGGTTGAAGAGTTGGGTAGGATTAAGAGAGAGCGTGAGATTCTTGTCCAGGAAAGAGCAATTTCTGCAGCAAAAGATGAAGCAGTGCTTGTTCTTTTGAAAAAGTTCACAGAAAATTCAGGCACAGTGGTGCACTTACCTGAGACAATCATGGTGACAAATGAGAAAGAAAATAACAACAATATGAAAGAAAATGATAATAATGGAGGGAGTGTGGTGGATAAGGATAAGTATAAGGAAGATTGTGGAAATGTTAATGTTGGAAGTTTCATGCAGATGAGTTCATCAAGATGGCCTAAAGATGAAGTAGAAGCTTTGATTAAATTGAGGACAGAGATGGAATTGCAGTGTCAAGGTAATGGATCTAAGGGACCTCTTTGGGAGGAGATTTCTTCTGCAATGAAAAGCATTGGCTATGATAGAAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTATTTCAAGAGGATGAAGGAGAAGAATAAGAGGAAGCCTGAGGATTCAAAAACATGCCCTTATTATCATCATCTAGAAGCTTTGTACTGTAGTAATAACAAGAAGCCTAAGAAGGTGGATGAATCAGGTGGTAGTTCTAGCAATGAGTTGAGACCTGAAGAGCTGTTATTGCATATTTTGGGTAATCAAGAAGAGAGACCACAACAACAAGAGTCATCATCTGAAGATGGTGAAAGAGAGAATGTGGATGATCAAAACCAGCATGAAGATCCATTACTAATAGTCCTTCCATAG 1530 0.4131 MLENSTLPEENLNHMENNNLQQQVRETDTSGGWPVVSVSDGFKPEEEHGGEEDGDRNSTVNRWPREETMALLKIRSEMDTAFRDISPKAPLWEQVSRKLLELGYHRNGKKCKEKFENIYKYHRRTKEGRFGKSNGKTYRFFEQLEALDNNPLPPHSSLLDGQVGKVTEAYVVPNDVIKDAVPCSIRFPNGNMVNVDHNNSSSTSSSGGSREGKKKRLTQFFEGMMREVIENQERLQRKLMEVLDKCEKERKVREEAWKVEELGRIKREREILVQERAISAAKDEAVLVLLKKFTENSGTVVHLPETIMVTNEKENNNNMKENDNNGGSVVDKDKYKEDCGNVNVGSFMQMSSSRWPKDEVEALIKLRTEMELQCQGNGSKGPLWEEISSAMKSIGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEALYCSNNKKPKKVDESGGSSSNELRPEELLLHILGNQEERPQQQESSSEDGERENVDDQNQHEDPLLIVLP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0614 509 PANTHER - 1 501 - -
Lal4g0614 509 MobiDBLite consensus disorder prediction 446 509 - -
Lal4g0614 509 MobiDBLite consensus disorder prediction 481 499 - -
Lal4g0614 509 MobiDBLite consensus disorder prediction 41 60 - -
Lal4g0614 509 CDD GT1 353 418 - -
Lal4g0614 509 ProSiteProfiles Myb-like domain profile. 347 411 IPR001005 -
Lal4g0614 509 SMART sant 59 121 IPR001005 -
Lal4g0614 509 SMART sant 351 413 IPR001005 -
Lal4g0614 509 CDD GT1 61 126 - -
Lal4g0614 509 Pfam Myb/SANT-like DNA-binding domain 61 147 IPR044822 -
Lal4g0614 509 Pfam Myb/SANT-like DNA-binding domain 353 440 IPR044822 -
Lal4g0614 509 ProSiteProfiles Myb-like domain profile. 55 119 IPR001005 -
Lal4g0614 509 MobiDBLite consensus disorder prediction 1 60 - -
Lal4g0614 509 MobiDBLite consensus disorder prediction 192 214 - -
Lal4g0614 509 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 501 - -
Lal4g0614 509 Coils Coil 225 249 - -
Lal4g0614 509 Gene3D - 63 124 - -
Lal4g0614 509 Gene3D - 355 416 - -
Lal4g0614 509 MobiDBLite consensus disorder prediction 192 208 - -
Lal4g0614 509 SUPERFAMILY Homeodomain-like 351 422 IPR009057 -
Lal4g0614 509 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0614 Lal-Chr4 4518878 4521579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0614 51 446 Trihelix Transcription Factor Family AT1G76880 46.476 5.87e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal4g0614 Myb_DNA-bind_4 1.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0614 - - gmx:100805632 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0614 4 4518878 4521579 Lal4g0614 4 4518878 4521579 ECH