Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0612 ATGCAAGGAAACAAACCCTATGTGGTTGTGTTTGCCATACAAGCCATATATGCTGCTATGTTTCTTCTCTCAAAAGTTGCATTTGATCATGGCATGAACAATTTCATCTTCGTCTTTTATAGACAGGCTATAGCAACCTTTTTTCTTCTCCCTTTTGCTTTTTTCTTTGAACGGAAAACTGCACCACCGTTGTCATTCCTGACTTTCTGCAAGATTTTCTTCCTTTCTTTATTTGGTATTACATTGAGCTTGGACATATATGGTATTGGTGTTATATACACCTCTGCCACTATGGCTGCTGCTGCCACTAACTCCCTTCCGGTTATAACCTTCGTTTTGGCGCTCATACTCAGGATTGAAACTTTGAAAATAAAGACTGGTGCTGGGATTGCTAAGTTGGTAGGCATTATTGCATGCTTGGCTGGTGTAGCAACTCTTGCCCTTTATAAAGGTCCAAGTTTGGAATTTTTAAGCCATCATCACCTTTTGAATTACCATGAAAGCAAACCACATGAAATTCATGAATCATCTAGTAGATGGATAAAGGGTTGTTTCCTATTACTCTTATCTAACACCTTTTTTGGGCTATGGCTTGTGCTACAGTCTTTTGTTATTAATGTTTACCCTTCAATGCTGCTCTTCACAACTATTCAGTGCTTTTTAAGCTCAATTCAGTCTTTTGTTATTGCGATTGCTATTGAAAGGGACATAGAACAATGGAAGTTGGCTTGGAATATCAGGCTTCTAGCTGGGATTGTGGTGACGGGTGTTACATATTGTTTACAAACATGGATTATAGAGAAGAAAGGACCTGTGTTTCTAGCCATGTCATCACCACTGGCTTTGATTATGACAATCATCTCCTCTGCACTTGTCTTGGGCGTTATAATAAGATTGGGAAGGTAA 906 0.3896 MQGNKPYVVVFAIQAIYAAMFLLSKVAFDHGMNNFIFVFYRQAIATFFLLPFAFFFERKTAPPLSFLTFCKIFFLSLFGITLSLDIYGIGVIYTSATMAAAATNSLPVITFVLALILRIETLKIKTGAGIAKLVGIIACLAGVATLALYKGPSLEFLSHHHLLNYHESKPHEIHESSSRWIKGCFLLLLSNTFFGLWLVLQSFVINVYPSMLLFTTIQCFLSSIQSFVIAIAIERDIEQWKLAWNIRLLAGIVVTGVTYCLQTWIIEKKGPVFLAMSSPLALIMTIISSALVLGVIIRLGR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0612 301 PANTHER WAT1-RELATED PROTEIN 7 300 IPR030184 GO:0016021|GO:0022857
Lal4g0612 301 PANTHER WAT1-RELATED PROTEIN 7 300 - -
Lal4g0612 301 Pfam EamA-like transporter family 182 298 IPR000620 GO:0016020|GO:0016021
Lal4g0612 301 Pfam EamA-like transporter family 6 135 IPR000620 GO:0016020|GO:0016021
Lal4g0612 301 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0612 Lal-Chr4 4498253 4502634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0612 1 263 Nodulin-like Gene Family AT5G64700 58.427 2.90e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0612 - - gmx:100804562 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0612 4 4498253 4502634 Lal4g0612 4 4498253 4502634 ECH
Lal21g0651 21 4987840 4991882 Lal4g0612 4 4498253 4502634 ECH
Lal17g0709 17 5016503 5019614 Lal4g0612 4 4498253 4502634 LSH
Lal21g0651 21 4987840 4991882 Lal4g0612 4 4498253 4502634 LSH