Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0603 ATGAAACCCAAACACTTACAACAAAGTTCCTCTTTCTTCTTCTTCTTCTTCTCTCTCTTCATATTCTTCCCTTTCTCTTCTCCTTCACCTCAACAACAACTTCTCAACTTCAAAGCAACTCTCCCTAACCCTTCCATTCTCTCTTCATGGCTCCCAAACCAAAACCCATGTTCATTTAACGGCGTCACCTGCAACAAAATCACTAACCAACTCTCTTCCATTAACCTCACCTCCATCCCCCTCACCGTTAACTTCACGGTTATCTCCACCCACCTTCTCTCCATCGACCATCTCCAAATCCTCACCCTTCATTCCACCAATCTAACGGGCACCATCACTCCTCTCAAAAAATGCTCAACCTCTTTAACCACCCTAGACCTCTCCTTTAACTCTCTCTCGGGTTCAGTTTCTGACTTAACCACCTTTTCCCTTTGCACAACGCTTCAATCCCTTAACCTCTCCAATAACCTTCTAGAATATTCCTCACTGAACCAACCCTCTTGGAAACCATGGACCCTAGCCCTCGAACTCATTGACCTCTCTCACAACATGATTTCTGGTCCTGACTTTCTTCCTTGGATCCTAACCCATGGGTGCGATGGGTTAAACCAACTTCACCTCCAAGGTAATAAGTTAACCGGACAAACCGATTTCTCCGGTTGCAGTAACTTACAGTATTTAGACCTTTCCGGTAACAATTTCTCCGTTCAAATCCCGTCTTTCGGTGAATGCATTTCTCTACAGTTTCTTGATATTTCTTCTAACAAATATTTTGGTGATATTTCGAAATCACTGTCATATTGCAACAAGCTTAGTTACCTCAATGTTTCAAGTAACCAATTTTCCGGTTCGGTTCCGGTTTTTCCTTCCGGTTCAGCTCTGCAGTTTCTCTACTTCGATAACAACCATTTCTTCGGTGAGATTCCGGTTCGCCTTGCCAGTAACCTCTGCTCTACGCTAATTGAGCTGAATCTATCTCACAACAACGTTTCCGGTACAGTACCGAGCGAATTTGTCACCTGCTCTTCGCTCCAATTGCTGGATATCTCACACAACAAGTTCACCGGGGAGTTGATGATTTCGGTTTTCGCCGAAATGAGCAGCCTTAAAAAGCTTGTTCTGTCCTTCAATGAGTTCACTGGGTCTCTACCGGAATCTTTTTCGAAGATGGTGGGTCTGGAATTGTTGGATCTGAGTGCTAATAACTTGTCTGGTTCAATTCCTAAAGGACTCTGTCAAGATCCTAAGAATAGTTTCAAGGAGCTTTATTTACAGAATAACAATTTCTCTGGTTCTATTCCATCCACATTAAGTAACTGTTCGAACCTTGTGGCGTTGGATTTGAGCTTCAATTACCTTACGGGTACTATCCCTGCTAGTTTAGGGTCTCTTACGAATCTTCGTGATTTGATAATGTGGCTCAATCAGCTTCACGGTGAAATACCACAAGAGCTAATGTACATGACTATGTTGCAGAATTTGATCCTGGATTTTAATTTCTTATCTGGAAACATTCCTTCTGGGTTAAGCAATTGCTCCAACTTGAATTGGATCTCGCTTTCGAATAATAGGCTTAGCGGCGAAATTCCATCTTGGATTGGGAAGTTATCCAATCTGGCTATTTTGAAGCTGAGTAATAACTCGTTCACCGGCCGGATTCCACCTGAGCTTGGAGATTGCAAAAGCTTGGTATGGTTGGATCTGAATACTAATGCGCTAACAGGGCCAATACCACCTGAGCTGTTTAAGCAATCGGGGGAAATCACATTGCATTTCATAAGTGGGAAGACTTATGCTTACATAAAGAATGATGGGAGGAAGGAGTGTCATGGTGCAGGGAACTTGCTGGAGTATGCAGGGATCAATCAGGCACAATTGAGCCGGATTTCAGTTATGGAAAGGAACTCTTGCAATTTCACTAGGGTTTATGAAGGTATGGTGCGGCCAACGTTTAACCGAAATGGTTCTATGATCTTTTTGGATATTTCATATAACATGTTGTCTGGTAGTATTCCCAAGGAGATTGGGGCAATGTACTATTTGACAATCTTGAATTTGGGTCACAATAATATATCTGGGAGCATTCCAGAAGAGCTTGGGAATGTGAAAGAGCTCAATATTCTTGATCTGTCTTACAATAGGCTTGAAGGGGAGATTCCACCAACCTTGATAGGACTCTCCTTGCTTACAGAAATTGATTTTTCAAACAATTATCTCACTGGGTCGATTCCTGAATCCGGCCAATTCGATACGTTTCCAGCAGCCAAGTTTATAAATAATTCTGGTCTATGTGGAGTTCCTCTTAATAAATGTGTGTCAGGCATAGGACCCAGTGCAAGTGCCCAACATCAGAGGTCTCACAGGAGTCGGGGATCTCTTGTGGGGAGCATCGCCATGGGGTTGTTATTCTCACTCTTCTGCATCTTTGGTTTGATTATAATTGCCGTTGAGACCAAAAATAGGAGGAAGAAGAAGGAAGCTGAGCTTGATGCTTACATTGACGGTAATTCTCATTCGGGTAATGCCAATTCAGGCTGGAAATTCACCAGTGCCCGCGAAGCGCTTAGCATAAACCTTGCTACATTCGAGAAGCCCCTCAGAAAGCTCACTTTTGCAGATCTTCTTGAAGCTACCAATGGCTTTCACAATGACAGTCTTATTGGTTCGGGCGGTTTTGGTGACGTGTACAAGGCTCAGTTGAAGGATGGTAGTGCTGTGGCCATCAAGAAATTGATACGTATAAGTGGACAAGGGGACAGAGAGTTCACCGCTGAAATGGAAACCATTGGGAAAATCAAGCATAGGAACCTTGTTCCCCTTCTGGGCTATTGTAAGGTTGGAGAAGAAAGACTCTTGGTTTATGAGTACATGAAATATGGGAGTCTAGATGATGTTCTGCATGACCCGAAGAAAGCCGGGATCAAGCTGAACTGGTCAGCGAGGAGAAGAATTGCCATTGGAGCTGCCAGGGGATTGGCTTTTCTTCATCACAATTGCAGCCCCCACATCATTCACAGAGACATGAAATCAAGTAATGTGTTGCTTGATGAGAACTTGGAAGCTAGAGTCTCTGATTTTGGAATGGCTAGGCTTATGAGTGCGATGGATACCCATTTGAGTGTGAGCACATTAGCTGGCACCCCAGGCTATGTTCCTCCTGAATACTATCAAAGCTTTAGATGCTCCACCAAAGGTGATGTTTATAGCTATGGTGTAGTGTTGTTGGAGTTGCTCACAGGGAGAAATCCCACGGATTCAGCAGATTTTGGTGATAACAATCTTGTGGGGTGGGTGAAACAACATGCCAAACTGAAGATAAGTGATGTTTTCGACCCGGAGCTGATGAAGGAAGACTCCAACCTAGAAATTGAACTTCTACAGCACTTGAAGGTTGCTTGTGCTTGTTTGGATGATAGATCATGGCGGCGACCAACAATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAGGCCGGGTCAGGGATGGATTCGCAGTCTACCATAGCTACAGAATATGAAGGCTTAAATGATCTTGAAATGGTTGAAATGAGCATTAAAGAAGTCCCTGAGTTAAGCAAGCCTTAA 3585 0.4349 MKPKHLQQSSSFFFFFFSLFIFFPFSSPSPQQQLLNFKATLPNPSILSSWLPNQNPCSFNGVTCNKITNQLSSINLTSIPLTVNFTVISTHLLSIDHLQILTLHSTNLTGTITPLKKCSTSLTTLDLSFNSLSGSVSDLTTFSLCTTLQSLNLSNNLLEYSSLNQPSWKPWTLALELIDLSHNMISGPDFLPWILTHGCDGLNQLHLQGNKLTGQTDFSGCSNLQYLDLSGNNFSVQIPSFGECISLQFLDISSNKYFGDISKSLSYCNKLSYLNVSSNQFSGSVPVFPSGSALQFLYFDNNHFFGEIPVRLASNLCSTLIELNLSHNNVSGTVPSEFVTCSSLQLLDISHNKFTGELMISVFAEMSSLKKLVLSFNEFTGSLPESFSKMVGLELLDLSANNLSGSIPKGLCQDPKNSFKELYLQNNNFSGSIPSTLSNCSNLVALDLSFNYLTGTIPASLGSLTNLRDLIMWLNQLHGEIPQELMYMTMLQNLILDFNFLSGNIPSGLSNCSNLNWISLSNNRLSGEIPSWIGKLSNLAILKLSNNSFTGRIPPELGDCKSLVWLDLNTNALTGPIPPELFKQSGEITLHFISGKTYAYIKNDGRKECHGAGNLLEYAGINQAQLSRISVMERNSCNFTRVYEGMVRPTFNRNGSMIFLDISYNMLSGSIPKEIGAMYYLTILNLGHNNISGSIPEELGNVKELNILDLSYNRLEGEIPPTLIGLSLLTEIDFSNNYLTGSIPESGQFDTFPAAKFINNSGLCGVPLNKCVSGIGPSASAQHQRSHRSRGSLVGSIAMGLLFSLFCIFGLIIIAVETKNRRKKKEAELDAYIDGNSHSGNANSGWKFTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSAVAIKKLIRISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLDDVLHDPKKAGIKLNWSARRRIAIGAARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRNPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDSNLEIELLQHLKVACACLDDRSWRRPTMIQVMAMFKEIQAGSGMDSQSTIATEYEGLNDLEMVEMSIKEVPELSKP 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0603 1194 Gene3D Ribonuclease Inhibitor 34 771 IPR032675 -
Lal4g0603 1194 SMART LRR_typ_2 561 584 IPR003591 -
Lal4g0603 1194 SMART LRR_typ_2 366 389 IPR003591 -
Lal4g0603 1194 SMART LRR_typ_2 390 414 IPR003591 -
Lal4g0603 1194 SMART LRR_typ_2 702 726 IPR003591 -
Lal4g0603 1194 SMART LRR_typ_2 488 512 IPR003591 -
Lal4g0603 1194 SMART LRR_typ_2 536 560 IPR003591 -
Lal4g0603 1194 Gene3D Transferase(Phosphotransferase) domain 1 957 1158 - -
Lal4g0603 1194 Pfam Brassinosteroid receptor island domain 586 652 IPR045381 -
Lal4g0603 1194 ProSiteProfiles Protein kinase domain profile. 881 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0603 1194 Gene3D - 591 653 - -
Lal4g0603 1194 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 25 1168 - -
Lal4g0603 1194 Pfam Leucine Rich repeats (2 copies) 223 263 IPR025875 -
Lal4g0603 1194 Pfam Leucine rich repeat N-terminal domain 32 65 IPR013210 -
Lal4g0603 1194 PANTHER SYSTEMIN RECEPTOR SR160 25 1168 - -
Lal4g0603 1194 SUPERFAMILY L domain-like 647 767 - -
Lal4g0603 1194 SUPERFAMILY L domain-like 55 314 - -
Lal4g0603 1194 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Lal4g0603 1194 Pfam Leucine rich repeat 361 403 IPR001611 GO:0005515
Lal4g0603 1194 Pfam Leucine rich repeat 513 573 IPR001611 GO:0005515
Lal4g0603 1194 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Lal4g0603 1194 Pfam Protein kinase domain 881 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0603 1194 ProSitePatterns Protein kinases ATP-binding region signature. 887 910 IPR017441 GO:0005524
Lal4g0603 1194 SUPERFAMILY Protein kinase-like (PK-like) 862 1153 IPR011009 -
Lal4g0603 1194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Lal4g0603 1194 SMART serkin_6 881 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0603 1194 Pfam Leucine Rich repeat 119 134 IPR001611 GO:0005515
Lal4g0603 1194 PRINTS Leucine-rich repeat signature 122 135 - -
Lal4g0603 1194 PRINTS Leucine-rich repeat signature 702 715 - -
Lal4g0603 1194 SUPERFAMILY RNI-like 262 580 - -
Lal4g0603 1194 Gene3D Phosphorylase Kinase; domain 1 842 956 - -
Lal4g0603 1194 CDD STKc_IRAK 887 1156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0603 Lal-Chr4 4400025 4403609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0603 32 1190 Receptor kinase-like Gene Family AT4G39400 66.667 0.0 1491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal4g0603 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0603 K13415 - gmx:100499629 1717.21