Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0602 ATGTCCACGACGTTTGTTAACCAAAGTTGTTTTGAAGAGCAAGATCAGATCCCTTCACAAATGGGATTCTTTCCTTTCCCACAAAACCTAACCCTTCCTCCTTTGAAAGACTTCACTGCCATAGCTCCTAATTCACTTTTATCTGTTGCTACTTCTAGTGAAAGTTTTGCAACAACCACTGTTAAAAAACCATGGCAAGATCTCACTTCTAGTTTTGGAGGAGAAGGCCAATTCCTTGCCATAAACAGATCGAGTGTAAATTCCTGGGCGTGGAGAGAAGTAGCAGATTGCATAATGGGTAAGAGGAGTGGAGGGCATGAACATCAACAACATGTAGGAGTTTCAGCCATGAAGATGAAGAAAATGAAGGGAGGAAGGAAGGTAAGAGAGCCTAGGTTTTGCTTCAAGACCTTGAGCGAAGTGGATGTGTTGGATGATGGATACAAGTGGAGAAAGTACGGACAGAAAGTGGTAAAGAACACACAGCACCCAAGAAGCTACTATCGTTGCACCCAAGATAATTGTCGAGTAAAGAAACGAGTAGAGCGTTTTGCTGAGGATCCAAGAATGGTGATAACTACATATGAAGGAAGACATGCTCACTTTCCATCAAATGAACTTGAAGAATCGCAATCTCCATCTCCATTTACCAATTTCTTTTGGTAG 666 0.4189 MSTTFVNQSCFEEQDQIPSQMGFFPFPQNLTLPPLKDFTAIAPNSLLSVATSSESFATTTVKKPWQDLTSSFGGEGQFLAINRSSVNSWAWREVADCIMGKRSGGHEHQQHVGVSAMKMKKMKGGRKVREPRFCFKTLSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERFAEDPRMVITTYEGRHAHFPSNELEESQSPSPFTNFFW 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0602 221 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 53 211 - -
Lal4g0602 221 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0602 221 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0602 221 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g0602 221 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0602 221 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 211 IPR044810 GO:0003700
Lal4g0602 221 SUPERFAMILY WRKY DNA-binding domain 137 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0602 Lal-Chr4 4375826 4383674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0602 114 221 WRKY Transcription Factor Family AT4G39410 77.876 4.11e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal4g0602 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0602 - - gmx:100127389 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0602 4 4375826 4383674 Lal4g0602 4 4375826 4383674 ECH
Lal17g0698 17 4929304 4933257 Lal4g0602 4 4375826 4383674 LSH