Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0597 ATGCGTATTCTCCGAAACTACTACTCTTTCCAATGTTTCTCTACATTCACCAATAATCCATCATCTCATTACAGGAAACAAATCTCACTCGCAAATCTCTTTCAAAGATTTGGTTTTCCCACCTCCCACTTTCACCAATTCTTCTCTCTCAATCATCGCTTTCTCTTGAATTCCAATTTATTGGATTTAGAAAAATCACTCTCCACTCTCTTATCCTTCAAAATTCCCCAGAATTTTATTGTTTCTCTCATCCGTGATTGCCCCGGTGTGTTGGAACATCAGTTTCTCAAGAATTGGGAACTGGGTTTCCAGAAATTTAGGGTTTTTAACCCTTCCCCGTTGATGATGGTCAATTTCATGCAATGTTCTAAAAGGTTTCAGTTAGACCCAGTTGAGATCTCGAAAAAAGTTGAGATTTTTAAGGGTTTAGGGTTTTCTGATTCTGCAATGGCTATGGTTTTTGAGGGATTTCCCACTGCTATCGCGATGAGTGAAAGGGAAGTTGTTTCTGTGATTGAGTTTCTTGTAGAGTTTGGGATTCCCAGGGATGAGATTGATCGAGTTGTCCGTTACTATCCAAGGGTTTTAGGGTTTGGTGTTGAAGATAGGCTCAAACCATTGATTCATGAGTTGAGGGGTTTAGGATTTTCAGGCCGCGAGGTTAGAAAAGAGATAGTTAGGGATCCGAGGATTCTTGGAATGGAAGTAGGGGAGTTTTCGCGGTGTTTGCAGTTGTTGAAGAGTTTGAAGTGCAGAGAAGCGATCAAAGAGAGGATAATTGGAGAATGCGGTATGCTAAGGGCTTGTTTTGAAGTGAAACTGAGAGTGGATTGCTTATGTGGTCATGGATTGATTCGTAGAGATGCTTTAAAGGTATTATGGAAAGAGCCGAGATTGATTACTTATGATTTGGAGAATATTGAGAAGAAGATCGAGTTTTTAGTGCAGAGGATGAAATACAGTGTTGACTGTTTGCCCCATGTTCCTGAATATTTGGGTGTGAATTTGGAAAAGCAGATTGTGCCTAGATATACTGTGATTGAGTATTTGATAGCGAAAGGTGCAATTGGTCATGAGGTTGGATTGAAGGACCTGATCAAGCCAAGTAGGCTTAGGTTTTACAATTTCTATGTTAAGCCCTATCCAGAATGTGAAAAAATGTATGGAAGATTTTCTGGAGCCCTTGAAGTTAAAAGCAAGCATCCAGCAGGACTCTGGAAACTCTTCAAACCACAGAAGTTCACTGAAACTGATGAAGATGTGAAGAATATGAAGTCCTTCATGGAATTATTGGTGTAG 1299 0.3995 MRILRNYYSFQCFSTFTNNPSSHYRKQISLANLFQRFGFPTSHFHQFFSLNHRFLLNSNLLDLEKSLSTLLSFKIPQNFIVSLIRDCPGVLEHQFLKNWELGFQKFRVFNPSPLMMVNFMQCSKRFQLDPVEISKKVEIFKGLGFSDSAMAMVFEGFPTAIAMSEREVVSVIEFLVEFGIPRDEIDRVVRYYPRVLGFGVEDRLKPLIHELRGLGFSGREVRKEIVRDPRILGMEVGEFSRCLQLLKSLKCREAIKERIIGECGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLENIEKKIEFLVQRMKYSVDCLPHVPEYLGVNLEKQIVPRYTVIEYLIAKGAIGHEVGLKDLIKPSRLRFYNFYVKPYPECEKMYGRFSGALEVKSKHPAGLWKLFKPQKFTETDEDVKNMKSFMELLV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0597 432 Gene3D Transcription termination factor 3, mitochondrial 164 392 IPR038538 -
Lal4g0597 432 PANTHER CGI-12 PROTEIN-RELATED 42 430 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 42 430 - -
Lal4g0597 432 Pfam mTERF 128 241 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 Pfam mTERF 274 373 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 116 146 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 322 356 IPR003690 GO:0003690|GO:0006355
Lal4g0597 432 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0597 Lal-Chr4 4345757 4347055 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal4g0597 mTERF 5.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0597 - - cam:101513737 637.876