Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0592 ATGGATCCTTTTGATGATATTCTACCTGTAGCTCCGGCACGTGGGAGCAAGTTTATGCCAAAGGCTAAATTGAAACAGCCACCTCGAAAGGAAATATCTGCATCCGAACATGCAACCCCGTCTAAAGATGGAGAGAAAGAAGGTGTTTTATCATCTGCCAGCAGGGACACCGAAGGAATTTCTCGGGATGAGTGTCATAATGCAGTTGTTTCAACTTTAAATACGTCTGCTGAAGAGTCTCCAAATTTGTGTCATTCTTCACAAGTAGAGCCTCCGAATTTGGAGGATGACACAAATTCTGAAATGGGAAATCATCCACAAGTTAGTGTGGAAAGAGATACAGCAATCTTAGTGGATGATCCGTCTTCTTTGATCACAATGTCTGAAGTTGATGCTGATTGGAATTTTACAGATCATACAAAATTGTCCGAGGTAGAGTCCATGGATTTTGAATTGCATCCTTTCAGCAATGTCCTCCCTGACCCTGGTGCTAAGAATGCTCATAAGTTTCTACCCAAGATTAAACCACGACCTAGAGTAGGCACTACGCCGGATATTGCTTCTGCTTCAAATGATATGATTGAAAAGTCTGATGAGTTGCCTACTTCTTGCGCAAATGAAGTTCAATCTTTTAAACGTAGTGGTGATGGAAGTAGCAGACTAAACCAACCAACAAATTTACCTTTACCATTCTCCGAAGACAACAGTAGCTTTGAAGCAGTGATTCCACCCCAACTGGATTCCCCAGATGCTATGCTTTCAGAGGTTGCAAATCACGATGGAGAGACTGCAGATATATTTTGTGGGTTGGAATCCCTTGATGACTTTCTCACCCAGGCTGCCACTGATACAGATCCAACTTCTGAAATTCCAGTGCATGGAGAACTGACAGATGCTGCAGGTAGTCCCACATTGGCTGATTTTTTGCGTGCTGATGTTTCTGGAGAGAAAGAAGATGCCAGTAAGAGACAAGAGGATGGTTCATCATCACCATCTCTAAGCAAGGATAAAAGATCTTCTATAGCTGTTGAGAAGGATATGGGTAGTAATAGCTCAAGGCAGCTGAGAAAACATGCATCTCGTAGACCTGCTAACAACCCAGCGAATGGGGATGTTGATAATGATGATGACCTTGACCCTCCTTATAATCCTAATAGAGATGAACTTGAGGACAATGATGATGAATTTGAAGTGGACGATTCATCGAAGAAGGAGAGATCAGCAAGTAATTCAAAGAAGAAATCTGCAGCTAAAAACGGAAAAACACCTCGAAAGCGTAAGAAGGCTAATGAGGATTTAGAAAAAAATACTGAACAACCCCGTAAAAAGTTCTCTCATTCAACCCGACGTAAAAAAAGATGTGTGGACAAGGCTCTGCTTGAAATTCCTGAGGATGAACTTGATCCTTTGACATTGCCTATCAAGGATATTATTTTACTTGCAGAGTATAGGGAGCGGCTGGCGAAAAAGGAGGCATCTACTTCGAAAACATCTCTCCCCAAGCAAAGTGGTGGAGATTCTCTTCATGAGGCTGGTTATAATAATGAAGAGATGTTAGGTCCAGAAGATGATAGAGACCCAGATGATGATGAAGCCAGGGAAAGTATTCCAACGGCTGCCTCATTATTCAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGGAAATGGTCAAAACAAGATACTGAACTGTTTTATGAGGGTATTACACAGTTTGGCACAGATTTTTCTATGATACAACTACTTTTTCCTGATCGAACACGCCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAGCATCCTTTGCAGTTGTCTGATGCTGTTAGTAGTCGTACAAAAGATCACTCTCATTTTAAACTGCTGATTGAGCGACTGCAACAAGCTTCCACCAAGGCAAAAGATCAAGACCCGTATGGAGATGCCTCAGATTTCATGACAGGAACTGAGGTGGAGGACTTGACACCTGAAACTAATAATGAGGTCGGAAAAACAGAGCAGGATGCCAATGCTGAAGACGCCAACGTTAAAGACCAGGACGACGCTAATATTAAAGACCAGGAAGACGCCAATGTTAAAGACCAGGAAGATTCTGTGGCATTTCATAGTCCAGAACCTGATGATGATGATGAAGATGACTTTTCATGGTATAAAAGTGCACCTTGA 2169 0.4219 MDPFDDILPVAPARGSKFMPKAKLKQPPRKEISASEHATPSKDGEKEGVLSSASRDTEGISRDECHNAVVSTLNTSAEESPNLCHSSQVEPPNLEDDTNSEMGNHPQVSVERDTAILVDDPSSLITMSEVDADWNFTDHTKLSEVESMDFELHPFSNVLPDPGAKNAHKFLPKIKPRPRVGTTPDIASASNDMIEKSDELPTSCANEVQSFKRSGDGSSRLNQPTNLPLPFSEDNSSFEAVIPPQLDSPDAMLSEVANHDGETADIFCGLESLDDFLTQAATDTDPTSEIPVHGELTDAAGSPTLADFLRADVSGEKEDASKRQEDGSSSPSLSKDKRSSIAVEKDMGSNSSRQLRKHASRRPANNPANGDVDNDDDLDPPYNPNRDELEDNDDEFEVDDSSKKERSASNSKKKSAAKNGKTPRKRKKANEDLEKNTEQPRKKFSHSTRRKKRCVDKALLEIPEDELDPLTLPIKDIILLAEYRERLAKKEASTSKTSLPKQSGGDSLHEAGYNNEEMLGPEDDRDPDDDEARESIPTAASLFNYQSFMDKAPRGKWSKQDTELFYEGITQFGTDFSMIQLLFPDRTRHQIKLKYKKEERQHPLQLSDAVSSRTKDHSHFKLLIERLQQASTKAKDQDPYGDASDFMTGTEVEDLTPETNNEVGKTEQDANAEDANVKDQDDANIKDQEDANVKDQEDSVAFHSPEPDDDDEDDFSWYKSAP 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0592 722 MobiDBLite consensus disorder prediction 67 107 - -
Lal4g0592 722 Pfam Myb DNA-binding like 547 630 IPR039467 -
Lal4g0592 722 MobiDBLite consensus disorder prediction 425 443 - -
Lal4g0592 722 CDD SANT 556 597 IPR001005 -
Lal4g0592 722 MobiDBLite consensus disorder prediction 157 245 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 1 111 - -
Lal4g0592 722 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 15 712 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 311 343 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 24 63 - -
Lal4g0592 722 Gene3D - 557 621 - -
Lal4g0592 722 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 15 712 - -
Lal4g0592 722 ProSiteProfiles SANT domain profile. 556 600 IPR017884 -
Lal4g0592 722 SMART sant 553 601 IPR001005 -
Lal4g0592 722 MobiDBLite consensus disorder prediction 202 242 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 279 455 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 631 722 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 489 533 - -
Lal4g0592 722 MobiDBLite consensus disorder prediction 667 703 - -
Lal4g0592 722 SUPERFAMILY Homeodomain-like 555 603 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal4g0592 Myb_DNA-bind_7 6.5e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0592 K15198 - gmx:100792788 457.988