Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0585 ATGACATTCAAACGCAGGAACGGTGGCCGCAACAAGCACGGTCGTGGTCATGTCAAATTCGTTCGCTGCTCCAACTGCGGCAAGTGCTGTCCCAAGGACAAATCCATCAAGCGGTTTGTGGTGAGGAACATTGTTGAGCAGGCTGCAGTTAGAGATGTTCAGGAGGCTTGTGTTTATGAGCAATACGCACTTCCTAAGCTTTATGTGAAGTTGCAGTACTGTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGGGTTCGTTCTCGCACTGATAGGAGGAAGCGTGACCCTCCACAGCGCTTCATCAGACGCAGGGATGATGCACCAAGGCCTGGTCAGCCAGGTCAAGCACCACGCCCTGCTGGAGTAGCAGCTCCTCCCCGCGCCTAA 390 0.5308 MTFKRRNGGRNKHGRGHVKFVRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVYEQYALPKLYVKLQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVAAPPRA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0585 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g0585 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 128 - -
Lal4g0585 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Lal4g0585 129 MobiDBLite consensus disorder prediction 86 129 - -
Lal4g0585 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 128 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g0585 129 MobiDBLite consensus disorder prediction 90 110 - -
Lal4g0585 129 MobiDBLite consensus disorder prediction 113 129 - -
Lal4g0585 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0585 Lal-Chr4 4247220 4249915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0585 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 2.07e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0585 K02976 - gmx:100781822 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0674 17 4766107 4768190 Lal4g0585 4 4247220 4249915 LSH