Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0583 ATGACATTCAAGCGCAGAAATGGTGGACGCAACAAGCATGGCCGCGGTCATGTCAAATTCATTCGCTGCTCCAACTGCGGCAAATGCTGCCCAAAGGACAAAGCCATCAAGCGTTTTTTGGTGAGGAACATTGTTGAGCAAGCTGCAGTGAGAGATGTTCAGGAGGCTTGTGTCTATGAGCAATACACGCTGCCTAAGCTTTATGTGAAGATGCAGTACTGTGTTGCCTGTGCTATTCACTCTCATGTTGTGAGGGTTCGTTCTCGCACCGATAGGAGGAAGCGTGACCCTCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCCGGTCAAGCACCTCGCCCTGCTGGAGTAGGAGCTCCTGCTCCTCGCGCCTAA 393 0.5344 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVACAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPAPRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0583 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g0583 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 - -
Lal4g0583 130 MobiDBLite consensus disorder prediction 86 130 - -
Lal4g0583 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g0583 130 MobiDBLite consensus disorder prediction 90 110 - -
Lal4g0583 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g0583 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0583 Lal-Chr4 4238439 4239719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0583 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.74e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0583 K02976 - gmx:100781822 212.616