Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0572 ATGCCAAATCCAATAACAAATTTTGCAAAGAAAATAACACCACAAATATCAACCCTTTCAGAGAAAATGAGTATTCTTTTTCCTCAATGTGTCTTATCTAATAGGAAGAGGGTATTAAGAGAACTTCTTCAGGGTCATGAGTGTGCTACTAAGCTTAAGTTTCTGCTTCAAAACCCTATTATCTCTGATGGGTCTACTCTCTCAGCTGAAGAACTCTTGTCCAATGTGGAGAGATCTTTTACTCACTCTATTTCTGTGCTCACTTCTTCTGATACTGAAGTTGTTGATGAGGTTGGTCAGATTGTAAATTATGGAGAGAATGGGTCTCAGGTTGGTGCTAATTCTTGTAATGATTTGAGGTCTGAAGATTCAACTGAGAGTAAGAAGAGATCGTTGACAACAAGAACTAAGGATCGAAGAGGTTCATACAAAAGAAGAAGGACTTCAGAAACATGGACCAATATCTCTGAAACTATTGAGGACAATCATGCATGGAGAAAGTATGGGCAGAAGGAAATCCTTAATTCTAAATTCCCCAGGAGTTACTTCAGGTGCTCTAGGAAGTATGATCAAGGTTGCCAAGCAATCAAACAGGTTCAAAGGATAGAAGAGAAACCATTTATGTACCATACTACGTACATTGGTTTCCATACATGCAAAGACACCCTTAATGCTCCACAAATGGTCACATATTCTGATACTTTGGACTCAAAGGTACCAAATGAAAAGGATACTACTTTTTGCTCACAAATTATTCCAATTATAAAACAAGAATATCCCAAAGAAGACACCTTCAATAATGATCTTAAAGACAACTTGGACCCTACCCTTTGGTCTGATTTGAAGGATTTGGAACTATATAAGCCTGCCATTGTGCTTTCAAAGGATTTTGGGGTATTTCATTCTCATTTTAGCACTGATTTCCACTTTGATGAAAGTCATTTACTTTGA 951 0.3701 MPNPITNFAKKITPQISTLSEKMSILFPQCVLSNRKRVLRELLQGHECATKLKFLLQNPIISDGSTLSAEELLSNVERSFTHSISVLTSSDTEVVDEVGQIVNYGENGSQVGANSCNDLRSEDSTESKKRSLTTRTKDRRGSYKRRRTSETWTNISETIEDNHAWRKYGQKEILNSKFPRSYFRCSRKYDQGCQAIKQVQRIEEKPFMYHTTYIGFHTCKDTLNAPQMVTYSDTLDSKVPNEKDTTFCSQIIPIIKQEYPKEDTFNNDLKDNLDPTLWSDLKDLELYKPAIVLSKDFGVFHSHFSTDFHFDESHLL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0572 316 MobiDBLite consensus disorder prediction 113 148 - -
Lal4g0572 316 ProSiteProfiles WRKY domain profile. 154 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0572 316 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g0572 316 MobiDBLite consensus disorder prediction 121 148 - -
Lal4g0572 316 SMART WRKY_cls 159 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0572 316 Pfam WRKY DNA -binding domain 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0572 316 Gene3D WRKY domain 146 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g0572 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 32 287 IPR044810 GO:0003700
Lal4g0572 316 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 32 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0572 Lal-Chr4 4143921 4150750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0572 37 297 WRKY Transcription Factor Family AT3G56400 38.868 7.36e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal4g0572 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0572 - - gmx:100170683 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0572 4 4143921 4150750 Lal4g0572 4 4143921 4150750 ECH