Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0526 ATGGGTCATTGCTGTAGCAAAGGCGTTGCCGCCGACAACGAAACTAACGCCACCGATCACCGTCTGAAGCCGCCTCATCAGCCAGTAGCATCACCATCGCCGGTGATGCCTTCAGTCAACTCCGTCTCCACCGCTAGTGATGCAACTCCGGGGAGGCACACTTCGGCTAACTCCTTCTCCGTTAACAGCCCCTTCCCGAGCCCTCTTCCGGCGGGAGTAGCGCCGTCGCCGGCGATGACTCCCGGCCGGAAATTCAGGTGGCCTCTTCCTCCCCCATCACCTGCAAAGCCGATCATTGCGGCGTTACAGAGGTGGCAGGGGAAGATGGCGAAACCGAAAGACGGGCCGATACCGGAGGAGCAACAAGGTGAAGGTGGTGGTGGTGGTGAGGGAGAGAGGACTCTTGATAAGAGCTTTGGTTATGGGAAGAATTTTGGGGCGAAATTCGAATTAGGGAAAGAAGTGGGGCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAGGGTGAGCTTAAGGGTCAATCAGTGGCTGTGAAAATCATATCCAAATCTAAGATGACTTCAGCAATAGCAATCGAAGATGTACGGAGGGAGGTGAAAATGTTGAAGGCCTTGTCTGGACATACGAATTTGGTCAAGTTTTACGAGGCATTTGAGGATGTAAATAATGTCTACATAGTGATGGAGTTGTGTGAGGGCGGAGAACTACTTGACAGAATCCTAGATAGAGGTGGAAGATACCCAGAGGATGACGCAAAAGCTATTATTGTACAAATTCTAGATGTAGTTGCCTATTGTCATCTTCAAGGGGTTGTTCATCGTGATCTCAAACCAGAGAATTTTCTCTTTGTCTCAAAAGTGGAGAATGCTGGGATGAAAGTTATTGATTTTGGTCTATCTGATTTTGTTAGGCCAGGTAATATGCTAAATCAACCTAATATAGCCAGTATTAAGAGAATAAACAAGGAATCAAAAATCACATGGTTTTGTGCAATATGGTTTAATGCCTTTGGATTCTGTAAGGTACTAACACAGTACAATGGTGGAATAGTGATATTCTACCATATCAAAGTTCATCAACGACTTAATGATATTGTTGGCAGTGCATACTACGTTGCACCTGAAGTGCTGCATAGATCTTACAGTGTTGAAGCAGACTTATGGAGTATCGGAGTTATATCATACATATTGTTATGCGGAAGTAGACCATTTTGGGCACGTACTGAATCAGGAATCTTCCGGTCTGTGTTGAGAGCAAATCCCAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAAAGACTTTTGAACAAGGACCACAGAAAAAGGATGACCGCTGCACAAGCTCTAACTCACCCATGGTTGAGAAATGAAAAAATTGCCATTCCTTTAGATATTTTGATCTACAAGTTAGTCAAATCATATGTGCGTGCCTCACCTTTGAAACGTGCAGCATTGAAGGCTCTATCGAAAGCATTGCCAGAAGATGAACTTATCTACCTTAGAGCACAGTTTAGCCTCTTGGAACCAAAAGATGGCTTCATTTCACTTGAGAATTTTAGAATGGCTCTCATGAAAGTTGCAACAGATGCCATGAGGGAATCAAGGGTCTCTGACATATTAAATTTGATGGAGCCACTGGCCTATAAAAATATGGACTTCGAAGAGTTCTGCGCTGCGGCAATCAGTGTATATCAGCTGGAGGTTCACCAAGAATGGGAGAAAATTGCTACCACAGCTTTTGAACACTTCGAAGAAGCCGGAAACCGGGTCATTTCAGTTGAGGAGTTGGCACAGGAAATGAGTTTGGGCCCTTCAGCTTATTCATTGATGAGTGATTGGATAACAAAATCTGATGGAAAACTCAGCTTTGTGGGCTACACAAAATTTTTGCATGGTGTCACAGTTCGGACTTCAAATAATACAAGACACAGACAGCTAGTATAA 1974 0.4448 MGHCCSKGVAADNETNATDHRLKPPHQPVASPSPVMPSVNSVSTASDATPGRHTSANSFSVNSPFPSPLPAGVAPSPAMTPGRKFRWPLPPPSPAKPIIAALQRWQGKMAKPKDGPIPEEQQGEGGGGGEGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGQSVAVKIISKSKMTSAIAIEDVRREVKMLKALSGHTNLVKFYEAFEDVNNVYIVMELCEGGELLDRILDRGGRYPEDDAKAIIVQILDVVAYCHLQGVVHRDLKPENFLFVSKVENAGMKVIDFGLSDFVRPGNMLNQPNIASIKRINKESKITWFCAIWFNAFGFCKVLTQYNGGIVIFYHIKVHQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRNEKIAIPLDILIYKLVKSYVRASPLKRAALKALSKALPEDELIYLRAQFSLLEPKDGFISLENFRMALMKVATDAMRESRVSDILNLMEPLAYKNMDFEEFCAAAISVYQLEVHQEWEKIATTAFEHFEEAGNRVISVEELAQEMSLGPSAYSLMSDWITKSDGKLSFVGYTKFLHGVTVRTSNNTRHRQLV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0526 657 MobiDBLite consensus disorder prediction 1 92 - -
Lal4g0526 657 SMART serkin_6 149 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0526 657 SUPERFAMILY Protein kinase-like (PK-like) 140 485 IPR011009 -
Lal4g0526 657 CDD STKc_CAMK 148 463 - -
Lal4g0526 657 Gene3D - 481 637 - -
Lal4g0526 657 Pfam Protein kinase domain 356 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0526 657 Pfam Protein kinase domain 149 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0526 657 ProSitePatterns Protein kinases ATP-binding region signature. 155 181 IPR017441 GO:0005524
Lal4g0526 657 SUPERFAMILY EF-hand 497 642 IPR011992 -
Lal4g0526 657 MobiDBLite consensus disorder prediction 107 136 - -
Lal4g0526 657 Gene3D Phosphorylase Kinase; domain 1 143 238 - -
Lal4g0526 657 MobiDBLite consensus disorder prediction 33 65 - -
Lal4g0526 657 Gene3D Transferase(Phosphotransferase) domain 1 239 476 - -
Lal4g0526 657 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 313 - -
Lal4g0526 657 PANTHER SERINE/THREONINE-PROTEIN KINASE 358 647 - -
Lal4g0526 657 Gene3D - 503 571 - -
Lal4g0526 657 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 44 313 - -
Lal4g0526 657 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 358 647 - -
Lal4g0526 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Lal4g0526 657 ProSiteProfiles Protein kinase domain profile. 149 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0526 Lal-Chr4 3811992 3819109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0526 64 647 EF-hand Containing Proteins AT3G50530 59.833 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal4g0526 Pkinase 2.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0526 - - lang:109328769 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0601 17 4298309 4305286 Lal4g0526 4 3811992 3819109 ECH
Lal4g0526 4 3811992 3819109 Lal4g0526 4 3811992 3819109 ECH