Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0516 ATGATTTGGTCTTTGTTTAATGCCACTTCTATGATCTCTTCAATTTTCTTCATCTTAGTTTTCTCTTTCCTAATTCTTCGTTTCTTCAGAAAAACCTCAACTTTTCACATCCTCAACACATGGTGGTTCTCCTTTGAAAACCGCTTCCACGTGTATCAATCTTTCAAAGTTCCTTTCTACAATCAAAATTTTCAGGAAAATCAACTTTACCGGAAAATCATCACATACCTTGATTCTCTCCATTCCGTTCAAGATTCCGATTTCACCAACCTCTTCTCCGGTCACAACCCCTCCGATATCATCTTCCAACTCGATGCAAACCAAGTCGTCGACGATACCTTCCTCGGCGCAAAGCTCCGATGGGTTAAACACGCCGTATCCACCGCCGGAGGTGACTCCGATTCCGCTGCGCTCGTGCTCCGAATCAAGAAGAAAGACAAGCGCAGGATTTTCTTACAGTACTTCCAACACATTCTCTCAGTAGCCGACGAGATAGAACAACGTCGGAAGGAAATCAAACTGTTTATTAACACCGGCGCCGGCGAAAACTCGAGATGGCGATCGGTGCCGTTTAACCATCCAGCGAGCTTCGAAACAGTGATGATGGACACGGATTTGAAAAACAAAGTGAAATCCGATCTTGAACAGTTTCTGAAGTCCAAACACTACTATCACCGATTAGGACGTGTTTGGAAACGAAGCTATCTCCTTTACGGTTCATCAGGTACCGGAAAATCAAGTTTCATTGCAGCAATGGCGAAGTTCCTAAACTACGACGTTTACGACATCGATAACTCGAAAGTAACGAACGGTTCTGATTGGAAAACGCTTCTGATGCAAACAACGAGCAAGTCAATGATTGTGATCGAGGATCTCGACCGTTTATTATTGTCGAAATCAACGGCTGTTAATGTCAGCTTATCTAGCGTGTTGAATTTCATGGACGGCGTCGTTTCATGTTGCGGAGAAGAACGCGTGATGGTTTTCACAATGAACGGTTCAAAAGATGAGGTAGATGAAGCGGTTTTAAGACCTGGGAGGGTTGATGTTCATATACACTTTCCATTATGTGATTTCTCAACGTTCAAGATTTTAGCAAACAGTTACTTAGGATTGAAGGAGCACAAGCTTTTTCCACAACTGGAAGAGGTTTTTTCTCAGACCGGGCCCCGGCTCAGCCCGGCTGAAGTTGGTGAGATTATGATATCGAACCGGAACTCACCGAGCCGGGCCTTGAAAACCGTTATCACAGCTTTACAAGGGCAATCTAACGGTAGGTTGAATGAGAGCGGGTCGGGTCGGATCAGTTACAGTGGGCCTGATCCGGCTGCGGTGATTTGTAGAGAAAGTGTTCATACGGTGAGGGAGTTCAGGAAGTTGTATGGGCTTTTGAGTTTGGGTAGAAAAAAAGATGGGTTCAATTATTCAGGGCCCATAGAGAAAGAAGCTAAATAG 1455 0.4447 MIWSLFNATSMISSIFFILVFSFLILRFFRKTSTFHILNTWWFSFENRFHVYQSFKVPFYNQNFQENQLYRKIITYLDSLHSVQDSDFTNLFSGHNPSDIIFQLDANQVVDDTFLGAKLRWVKHAVSTAGGDSDSAALVLRIKKKDKRRIFLQYFQHILSVADEIEQRRKEIKLFINTGAGENSRWRSVPFNHPASFETVMMDTDLKNKVKSDLEQFLKSKHYYHRLGRVWKRSYLLYGSSGTGKSSFIAAMAKFLNYDVYDIDNSKVTNGSDWKTLLMQTTSKSMIVIEDLDRLLLSKSTAVNVSLSSVLNFMDGVVSCCGEERVMVFTMNGSKDEVDEAVLRPGRVDVHIHFPLCDFSTFKILANSYLGLKEHKLFPQLEEVFSQTGPRLSPAEVGEIMISNRNSPSRALKTVITALQGQSNGRLNESGSGRISYSGPDPAAVICRESVHTVREFRKLYGLLSLGRKKDGFNYSGPIEKEAK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0516 484 Pfam Domain associated at C-terminal with AAA 36 123 IPR025753 -
Lal4g0516 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 417 IPR027417 -
Lal4g0516 484 SMART AAA_5 231 358 IPR003593 -
Lal4g0516 484 Pfam ATPase family associated with various cellular activities (AAA) 236 356 IPR003959 GO:0005524|GO:0016887
Lal4g0516 484 CDD AAA 232 356 - -
Lal4g0516 484 PANTHER BNAANNG18710D PROTEIN 17 434 - -
Lal4g0516 484 PANTHER BCS1 AAA-TYPE ATPASE 17 434 - -
Lal4g0516 484 Gene3D - 187 356 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0516 Lal-Chr4 3741125 3742579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0516 227 354 Calmodulin-binding Proteins AT3G56690 25.000 2.93e-06 48.1