Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0515 ATGGCAGCTTTTACTTCAATTGCACTACATTACACATCTACACCATCTTTACAACACTTGGTACCTTCTTTAGAAGGTACACTTGATCATAATTCATGTTGGTTTAGAGTGAGATCACACAAATTCATAGGTCAAAGATTACACTCACATAATATTGCAAGAGGGCTAAAAATACAAAGTGCAGCTACTAAAGAAGCAAAATCACCAGCTGAAGAAGATTGGAGGGTTAAGAGAGAAAAACTGCTGGAAAAAAGGGTAAGAAGTGTGGAACCGAAAGAAGCTCTGCGTCTTCAGAAAGAAAATAAGTTTGTCATTCTCGACGTAAGGCCGGAAGCAGAATTCAAAGAGGCTCATCCTCCAGGTGCAATCAATGTGCAAATATACAGGCTTATTAAAGAGTGGACAGCATGGGACATTGCGAGACGCGCTGCATTTGCGTTCTTTGGTATTTTTGCTGGTACAGAAGAGAACCCTGAGTTCATCAAGATTGTTGAATCAAAACTAGATAAGAATGCAAAGATAATAGTAGCTTGCTCATCAGGGGGTACAATGAAACCATCACAAAATCTGCCAGAAGGTCAACAATCAAGGTCTCTTATAGCAGCTTATTTGCTGGTCCTTAATGGTTTCACCAATGTTTTCTATCTAGAGGGGGGTCTAAGCGCATGGTTTAAAGAGGGTCTGCCAACTGTTTCTGAGGAGTGA 705 0.4043 MAAFTSIALHYTSTPSLQHLVPSLEGTLDHNSCWFRVRSHKFIGQRLHSHNIARGLKIQSAATKEAKSPAEEDWRVKREKLLEKRVRSVEPKEALRLQKENKFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIKIVESKLDKNAKIIVACSSGGTMKPSQNLPEGQQSRSLIAAYLLVLNGFTNVFYLEGGLSAWFKEGLPTVSEE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0515 234 CDD RHOD 93 223 - -
Lal4g0515 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 30 234 - -
Lal4g0515 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Lal4g0515 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 231 IPR036873 -
Lal4g0515 234 Gene3D - 72 230 IPR036873 -
Lal4g0515 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
Lal4g0515 234 SMART rhod_4 89 229 IPR001763 -
Lal4g0515 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 30 234 IPR043186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0515 Lal-Chr4 3738329 3742730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0515 1 234 Sulfurtransferasese or Rhodanese AT4G27700 65.254 7.12e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0515 - - gmx:100788147 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0515 4 3738329 3742730 Lal4g0515 4 3738329 3742730 ECH