Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0502 ATGGAGTTTCACTCTCACTACTCTAATGATTTTACAAACATTGCAGTTCCTCAGAGCCCAAACTTGTTTTCCTATGCTCAACAGATAGAGACAACAAAAATAATGGATATTTCACCATGGGATGATTTATTCGAGTTTGGTTTCACACCTCATTTACCATACAATTACCAAAGTAATCAACTTTGCTTCAATGGGATAGATCTTGATAATCTCAACTTTGATGATATTGATCTTCCACACCTTGATGAAAAATTTGGAACTGAACAAAAGCCACTGAAAAACAAGGTTTTGCCACAGCCACTACCTAATCGCTTTGGTGAAGAAGGTTTAATGATTCATCTGAAGAAAGAAGTGAAGGAGAACAATGAAGAAATGATATTTCCTAGCAGCAAGAATAAGAAGATGTCATGTGTTTTGGTGAAGGAAGAAGTGATGGAGAATAATAGAGAACTAATATTATTGCCTAATACTAATAGCAATAACCATAGTTGCAAGAAGAGAAAGTCATGTAATTTAGAATATGATGAGATTAAGAAGCATTTTGGTGTTCCAATAACTCAAGCTGCTAAGGAAATGAATGTTGGATTGACATTGTTGAAGAGAAGGTGCAGAGAGCTCAATATAAAGAGGTGGCCTCATAGGAAACTAAAGAGCTTGGAATTCCTCATTGAAAATGTTAAGGAAATGGGTATGTCTAATGAAGTTGCTATGTTGGAACAACATAGAAAGATGTTGGAGAAATTACCTGATTTGGAATTGACTGAAGAGACCAAAAAATTGAGACAGACTTGTTTTAAAGCTAATTACAAGAAGAGATGGTGTTTAGTTTAG 831 0.3478 MEFHSHYSNDFTNIAVPQSPNLFSYAQQIETTKIMDISPWDDLFEFGFTPHLPYNYQSNQLCFNGIDLDNLNFDDIDLPHLDEKFGTEQKPLKNKVLPQPLPNRFGEEGLMIHLKKEVKENNEEMIFPSSKNKKMSCVLVKEEVMENNRELILLPNTNSNNHSCKKRKSCNLEYDEIKKHFGVPITQAAKEMNVGLTLLKRRCRELNIKRWPHRKLKSLEFLIENVKEMGMSNEVAMLEQHRKMLEKLPDLELTEETKKLRQTCFKANYKKRWCLV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0502 276 Pfam RWP-RK domain 171 219 IPR003035 -
Lal4g0502 276 ProSiteProfiles RWP-RK domain profile. 155 240 IPR003035 -
Lal4g0502 276 PANTHER PROTEIN RKD1-RELATED 30 272 - -
Lal4g0502 276 PANTHER PROTEIN RKD4 30 272 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0502 Lal-Chr4 3605422 3606752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0502 172 275 AtRKD Transcription Factor Family AT5G53040 64.423 5.11e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lal4g0502 RWP-RK 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0502 - - lang:109326526 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0502 4 3605422 3606752 Lal4g0502 4 3605422 3606752 ECH
Lal17g0574 17 4085199 4086722 Lal4g0502 4 3605422 3606752 LSH