Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0501 ATGGAGTTTCAATTTCACTACTCTCCTAATTTTCTTAACAATGAAATTCCTCAAAGCCCCAACTGGTTTTCCTCTCCTCAACTAACAGAAACAGACAGAGTAATGGATATTTCACAATGTGATGATTTCTTTGATTTCAGTTATGTACCTCAATTCTCACACCAAAGTAATCAACTTTTCTTCAATGGGTTACCTGAACTTGAAAATCTCAATTTTGAAGAAGACTTTGACCTTTTACCAAAAGATGAAAACTTTGGGGTTGAACAAAAACCACTGCACATGGTTGTGGCACAGCCACCACCACCTCATGGTTTTGGTGATCTAGCTTTGATGAATTGTGTGAAGAAAGAAGTGGATAAGAACAATGAAGGAATGTTGTTATTGCCTAATACTAATAGCAGCAGCAATATCAAGAAGAGGTCTAGTGCTTTGGAATTTGATGAGATAAAGAAGCATTTTGGTGTTCCAATAAGTGAAGCAGCAAAGGAAATGAATGTGGGTTTGACACTTCTGAAGAGAAGGTGTAGAGAACTCAACATCATGAGGTGGCCACACAGGAAATTGAAGAGCTTGGAGTTACTCATAAGGAATGTTAAAGAAATGGGGTTATCCGAGGAAATTGCTAGGTTGGAGCAACATAGAAAAATGTTGGAGAAACAACCTCATTTGGAATTAACTGAAGAGACCAAGAAACTTAGACAGACATGTTTTAAAGCTAATTACAAGAAGAGAAGGTGTTTTTCCCTTCAATATTGA 756 0.3704 MEFQFHYSPNFLNNEIPQSPNWFSSPQLTETDRVMDISQCDDFFDFSYVPQFSHQSNQLFFNGLPELENLNFEEDFDLLPKDENFGVEQKPLHMVVAQPPPPHGFGDLALMNCVKKEVDKNNEGMLLLPNTNSSSNIKKRSSALEFDEIKKHFGVPISEAAKEMNVGLTLLKRRCRELNIMRWPHRKLKSLELLIRNVKEMGLSEEIARLEQHRKMLEKQPHLELTEETKKLRQTCFKANYKKRRCFSLQY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0501 251 Pfam RWP-RK domain 144 191 IPR003035 -
Lal4g0501 251 ProSiteProfiles RWP-RK domain profile. 133 212 IPR003035 -
Lal4g0501 251 Coils Coil 200 220 - -
Lal4g0501 251 PANTHER PROTEIN RKD4 133 246 - -
Lal4g0501 251 PANTHER PROTEIN RKD4 133 246 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0501 Lal-Chr4 3597622 3599739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0501 144 251 AtRKD Transcription Factor Family AT5G53040 60.185 2.13e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lal4g0501 RWP-RK 3.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0501 - - lang:109327731 316.62