Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0496 ATGGGAAAGAAAGGAGGTGGTTGGTTCTCATCTGTAAAGAAAGTTTTTAAGTATTCTTCTAAGGATTCAATTCTGCCACAAAAGAAGGACAAAGATGAGAAATGGCAACATGAAGTACCAGTGGTTGTGTCTTTTGAGCATTTTCCTATAGAAAGTTCACCTGATGTTACCAATGAAGGTAGTAGTACAACATACACACCTGTGACTGAAGATAGACATCATGCCATTGCCTTTGCAGAGGCAACCGCCGCTGCTGCCGAAGCGGCGGTCGCGGCTGCTCAGGCTGCCGCTAGAGTTGTGAGAATGGCAGGTTATGGACGACACACTAAACAAGAAAGAGCAGCAACAGTCATTCAATCTTACAACAGAGGTTACCTTGCTGTACGCGCACTTCGTGCTTTGAAAGGATTAGTGAGATTGCAAGCCTTGGTGACGGGACATAATCAACAAAATTTGGAGATAGACCCAAATGGTTATGATATTGAAAGGTATGAAAATGAGCATGAAGCAGCTCAATGGAGTTTGGAGTGGTTGGAACAATGGACATCACAACCACACCATGTTATGCACTTGGGAGGCCCACATGAAATGACACTAACTACCACAACAACAGATAACATGTCTGAAGAAAAAACAGTTGAAATGCACATGGTTACACCATCAGACTCAACTAACTCCAATATGGGCCTCATGGGCCAAGAATTTCTTGATTCAAGCCCAATGTCTAATAGGTACCACCAGAGAGAGGATAGTTCTGGGGTACCTGGCTATATGACCCCAACCCAGTCTGCAAAGGCTAAGGTTCAAGGCCTGTTTAGGTATAGTGGGGCCACTGCAGGTCATCAGTTTCCTAAAAGCCCAAGCCCACAAATAAATGGGGTTCAACTCCAATTGAGACAGATTTTGAATGGGAACCTGAATATTGGCATTTAG 933 0.4405 MGKKGGGWFSSVKKVFKYSSKDSILPQKKDKDEKWQHEVPVVVSFEHFPIESSPDVTNEGSSTTYTPVTEDRHHAIAFAEATAAAAEAAVAAAQAAARVVRMAGYGRHTKQERAATVIQSYNRGYLAVRALRALKGLVRLQALVTGHNQQNLEIDPNGYDIERYENEHEAAQWSLEWLEQWTSQPHHVMHLGGPHEMTLTTTTTDNMSEEKTVEMHMVTPSDSTNSNMGLMGQEFLDSSPMSNRYHQREDSSGVPGYMTPTQSAKAKVQGLFRYSGATAGHQFPKSPSPQINGVQLQLRQILNGNLNIGI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0496 310 Coils Coil 76 96 - -
Lal4g0496 310 SMART iq_5 110 132 IPR000048 GO:0005515
Lal4g0496 310 PANTHER IQ-DOMAIN 21 1 150 - -
Lal4g0496 310 PANTHER IQ-DOMAIN 21 165 276 - -
Lal4g0496 310 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Lal4g0496 310 PANTHER IQ-DOMAIN 5-RELATED 165 276 - -
Lal4g0496 310 PANTHER IQ-DOMAIN 5-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0496 Lal-Chr4 3558553 3562392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0496 172 269 IQD Protein Family AT3G49260 36.607 6.52e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0496 - - aip:107605892 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0496 4 3558553 3562392 Lal4g0496 4 3558553 3562392 ECH
Lal17g0569 17 4055660 4060445 Lal4g0496 4 3558553 3562392 LSH
Lal21g0570 21 4227380 4233728 Lal4g0496 4 3558553 3562392 LSH