Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0491 ATGAAATTCAAACTCTCTGACCCTGGTGGTTCTTCCTCTTACTCCGAAGTTCATCCAAGACCAAACACTGCCACCACCACCAACAAAAAGATCATCTTCTTCTCTCTCCTCGCCGTATTCCTAATCCTCGCCTCCGCAGTCTCCGCGGTTGTCATCCTCTCTGTCCGTACACGAGCTTCCAGGAATGACCAAAATGCCCCCACCCTCCGCGGCAAGCCCACGGAAGCTATCTCCAGAACCTGCAGCAAGACACAATTCCCCACACTGTGCATAAACTATCTACTCAATTTCCCTGGTTCCAAAACGGCGTCGGAGAAAGACCTTATCCACATTTCCTTTAACATGACACTACAACATCTCAACAAAGCTCTCTACTCCTCCACCTTGCTCTCCTCTTCAGTCTCTTCCGTCAACCCTCGCGTCACCGCCGCCTATGATGACTGCCTTGAACTCCTTGACGACTCCATCGACGCCGTCGCCCGATCCCTCAGCACCGTCGCCACTCCCTCCTCCGTCTCCGGTACCGTCAGGTCTCTAGGCTCCTCCGATGACGTCATGACGTGGCTGAGCGCCGCACTCACCAATCAGGACACGTGTGCGGAGGGATTTGCCGACACAAGCGGTGACATTAAGGAACAGATGTCGAACAACCTTAGGGACATATCTGAGCTCGTTAGTAACTGTCTGGCGATATTTTCCTCTGTGGGTGCTGGTGAAGACTTTTCAGGAGTACCAATACAGAATAAGAGAAGATTGATGACAATGCGAGAAGATAAATTCCCGATATGGTTGAAAACACGAGATAGGAGATTATTGGGTTTGCCTGTGTCTCAGATTCAAGCTGATATTATCGTTTCCAAAGATGGTAATGGAACTGTCAAGAAAATCTCTGAGGCCATTAAGAAAGCACCGGAGTATAGTAGCCGCCGATTCATTATCTACATAAGAGCAGGAAGATACGAAGAGCAGAATTTAAAAGTGGGGAGGAAGAAAACGAATCTGATATTCATAGGGGATGGGAAGGGCAAAACGGTAATTACAGGCGGCAAAAACTTTTTGAATGGCACCACCACATTTCGCACCGCATCCTTCGCTGCTAGTGGTGCTGGTTTCATAGCAAGGGACATAACATTCGAGAACTACGCCGGACCAGAGAAGCATCAAGCAGTGGCCCTCCGTGTCGGATCCGATCACTCGGTGATCTACCGCTGCAGCATCATCGGCTACCAGGACACATGCTATGCTCACTCTAATCGTCAATTTTACCGCGAATGTGACATTTATGGCACGGTTGATTTCGTATTTGGCAACGCCGCGGTGGTTTTCCAAAACTGCAGTCTCAATGCCCGCAAGCCCATGGCCCAACAAAAAAATACAATCACGGCCCAAAACAGAAAGGATCCAAACCAAAACACGGGTATCTCGATCCACGACTGTCAGATCAGGCCCACTCCAGATTTGGAAGCAGTAAAGGGTAGCTACCAAACTTATCTGGGCCGTCCATGGAAACTATACTCTAGAACAGTATACATGATGTCATATATGGGTGATCACGTACATCAACGTGGATGGTTGGAATGGAATACCACATTTGCCTTAGACACATTGTATTATGGTGAGTACATGAATTATGGGCCTGGTGCAGCAATTGGGCAGAGAGTAAAATGGCCCGGGTATCGGGTCATCACATCGACAGTAGAAGCAAGCAGGTTTACGGTGGGCCAATTCATATCGGGCTCAACGTGGTTGCCCTCTACCGGAGTTTCATATTTGGCTGGGCTATCCACCTGA 1791 0.4897 MKFKLSDPGGSSSYSEVHPRPNTATTTNKKIIFFSLLAVFLILASAVSAVVILSVRTRASRNDQNAPTLRGKPTEAISRTCSKTQFPTLCINYLLNFPGSKTASEKDLIHISFNMTLQHLNKALYSSTLLSSSVSSVNPRVTAAYDDCLELLDDSIDAVARSLSTVATPSSVSGTVRSLGSSDDVMTWLSAALTNQDTCAEGFADTSGDIKEQMSNNLRDISELVSNCLAIFSSVGAGEDFSGVPIQNKRRLMTMREDKFPIWLKTRDRRLLGLPVSQIQADIIVSKDGNGTVKKISEAIKKAPEYSSRRFIIYIRAGRYEEQNLKVGRKKTNLIFIGDGKGKTVITGGKNFLNGTTTFRTASFAASGAGFIARDITFENYAGPEKHQAVALRVGSDHSVIYRCSIIGYQDTCYAHSNRQFYRECDIYGTVDFVFGNAAVVFQNCSLNARKPMAQQKNTITAQNRKDPNQNTGISIHDCQIRPTPDLEAVKGSYQTYLGRPWKLYSRTVYMMSYMGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAIGQRVKWPGYRVITSTVEASRFTVGQFISGSTWLPSTGVSYLAGLST 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0491 596 PANTHER PECTINESTERASE 22 594 - -
Lal4g0491 596 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 233 IPR035513 -
Lal4g0491 596 Pfam Plant invertase/pectin methylesterase inhibitor 76 231 IPR006501 GO:0004857
Lal4g0491 596 CDD PMEI-like_3 81 233 - -
Lal4g0491 596 PANTHER PECTINESTERASE 22 594 - -
Lal4g0491 596 SMART PMEI_2 72 231 IPR006501 GO:0004857
Lal4g0491 596 MobiDBLite consensus disorder prediction 8 22 - -
Lal4g0491 596 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 235 IPR035513 -
Lal4g0491 596 SUPERFAMILY Pectin lyase-like 278 593 IPR011050 -
Lal4g0491 596 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 233 IPR006501 GO:0004857
Lal4g0491 596 Pfam Pectinesterase 282 579 IPR000070 GO:0030599|GO:0042545
Lal4g0491 596 ProSitePatterns Pectinesterase signature 2. 427 436 IPR033131 -
Lal4g0491 596 MobiDBLite consensus disorder prediction 1 22 - -
Lal4g0491 596 Gene3D - 276 594 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0491 Lal-Chr4 3519361 3523699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0491 18 595 Carbohydrate Esterase AT3G49220 65.232 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0491 - - gmx:100776752 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0491 4 3519361 3523699 Lal4g0491 4 3519361 3523699 ECH