Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0484 ATGGCAACCCCAACTTTACTGAATTCCAAAGTCAAACACTGTTTTGGTTTCACAAACATGAACAACATTCCCAAACTCAACATCTCCTTAATTTTCCTATGCCTCTTCAACACAATCCCAACATCACTCCTAGTATTAGCAAACATAGAAACATGTTTGGATAGTGTTTGTCATATGAAGGAACCAACAATCAGATTCCCATTCCAGATAAAAGAGAAACAACCAAAGACATGTGGATACCCAGGATTTAGAGTATCATGCAGTGAAAAAGGTCAAATACTTCTCAAATTACCTAACTCAGGAGAATTTAGCATCAAAGCTATAAACTATATCACTCAACAAGTATGGTTGAATGATCCCAATAATTGTCTCCCAAAACGAATTCTTTCACTCAATCTATCTGGTTCCCCATTTGATGCTGTTTACTACCAACAATTTACCTTCTTTAACTGCTCCTTCAACTTGGAGTATCTATCATATAGGTACAATCACATATCTTGTCTAAGTGATTCTAATAAGTACCATGTAATTGCCACATCATCATCAAATGTGGTTAAATATTTGTCGTCTGTTTGTGAGTTGGTTGGAACGGTTAAGGTACCTGTCCAATCGCCGATTTATGATCATGTTCTATCATCTGAACTTACTGATGATCTGCGGCTGTCATGGGAGTCGCCGCCGTGTGGGAGGTGTGAGTCGCAGGGTGGCCGCTGTGGCTTCAATTTTAGCACCACCAACTCCTCCACTCTTGAAATTGGTTGTTCCAATTTTCCTTCAAAAGGTACTTACTACTTGCTTTTCTACCCATTTCTTGCACCCACAACATTTACTCAAGAGTAA 840 0.3893 MATPTLLNSKVKHCFGFTNMNNIPKLNISLIFLCLFNTIPTSLLVLANIETCLDSVCHMKEPTIRFPFQIKEKQPKTCGYPGFRVSCSEKGQILLKLPNSGEFSIKAINYITQQVWLNDPNNCLPKRILSLNLSGSPFDAVYYQQFTFFNCSFNLEYLSYRYNHISCLSDSNKYHVIATSSSNVVKYLSSVCELVGTVKVPVQSPIYDHVLSSELTDDLRLSWESPPCGRCESQGGRCGFNFSTTNSSTLEIGCSNFPSKGTYYLLFYPFLAPTTFTQE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0484 279 Pfam Wall-associated receptor kinase galacturonan-binding 52 119 IPR025287 GO:0030247
Lal4g0484 279 Pfam Wall-associated receptor kinase C-terminal 174 245 IPR032872 -
Lal4g0484 279 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 31 261 - -
Lal4g0484 279 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 31 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0484 Lal-Chr4 3438012 3440647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0484 50 257 C3H Transcription Factor Family AT2G46495 37.441 2.26e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0484 - - gmx:100818969 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0484 4 3438012 3440647 Lal4g0484 4 3438012 3440647 ECH