Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0478 ATGATGGATTGCAACAGAGATGAGGCTCTTAGGGCCAAAGAAATAGCAGAGAGGAAGTTTTCAGAAAGGGAATATGTTGGGGCGAAGAAGTTTGCCCTCAAGGCTCTAAATCTATATCCTGAATTGGAGGATCTTTCCCAGTTTTTGACTACTCTTGATATTTATATCTCTGCCGAGAATAAAGTAAGTGGAGACTTGGATTGGTATGGTATTCTCGGAGTGAGCCCCTTTGCTGATGATGAGACTGTTAGGAAGCAGTACAGGAAGTTGGCTCTCACCCTTCATCCTGACAAAAACAAGACTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCTGAAGCATGGAGTTTGCTATCAGATAAAACCAAGAGATTAGCATATAACCAAAAGAGGACTGGAATTAATCCCAATCATGCCAGATCTCAATCAGATGCACCCGGTTCAAATGGTATTTATAATTTCAAGAAGAATGTAACCTCAAATGTGAGGACTGGAACTAATGCCCGGGCACCCTCAGCTCCAGCTCCTCCTCCACAGAAAAGGGGTGAAACCTTTTGGACCATCTGTAATGGGTGTAAGACACATTATGAATATCTCAGGGTTTACTTGAATCATACCCTTTTATGTCCCAACTGCAATGAAGCTTTTATGGCTGTTGAGAGGGGTCCACCTCCCAATGTTTCTAAGTCACCAAATTGGTCTTCTCAAAAGAATCAGCACACTCGACACCATGCTGGAACTAATAACACAAATGCTCAGTGGGATTCTCACAGATCATCATCTGTTGCTGCTCAAATTGTGCAGCAGGCAAGTGAGAAAGTGAAGAGAGAGGCAGCACCATCATTTTCTGAATGGGAAAGGAAGAGGACTGATGGTTTGAAGAAAAGGAGGACAGATGATATTCACATTAATGGTTATCAAGGGCACGTGGCAAATCGTATGGGAATGGGACATGGAGCAGCCGGTGCGGGCAGTTTTTCTGAATCAGGAAAGGCTAACATGGGAATACAAAGGAACTATGGTTTTTCAGGTGTTACTGGAAAGCATTACAGCACTAGAGAGTTGTCAATGTTTGAACTGCGAAACATGTTGATGGATAAGGCAAAGAGTGACATTCGTAAGAAACTTCAACAATGGAGATCAGTGGCTGAAGCTAAGGATACCAACAAAGACAGAGGGAATAAGAGACAGAAAAGCACGTTTAATGACAAAGCCAGTTCAGAGAAGCATGTAGAGTCCACTGATAATGGTCACAAGCGTCTGGTAATTGATTCTTTCCCCGTCACATCTGATGATGCAGTTAAGAAGAGCCAAGCCTATATTACAATCAATGTTCCGGACCCTGATTTTCACAATTTTGACTTGGATAGATCTGAAAATGCCTTTGAGGATGACCAGGTCTGGGCTGCTTATGATGACGACGATGGAATGCCTCGATACTATGCTAGAATTCACAAGGTGATCTCCACAAATCCATTTAGAATGCAGATCAGCTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCTATAGATTGGATAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGGCCGGCAAGCATGAACCATCTGAGTCATTAAATTCTTTTTCACACAAGGTTAGGTGGACAAAGGGCAACCGAGGAGTTATTCGCATCTTTCCTGGAAAGGGCGAAGTCTGGGCTCTTTATCGAAATTGGTCTTCTGATTGGGATGAACGTACACCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTACTTGAAGATTTCAATGAGGAGCAAGGTATAGTAGTTACCCCCCTTGTTAAGGTTGCTGGTTTCAGAACAGTGTTTCAGAGGCACATGGACCCTGATAAGGTAAGGAGGATCCGGAAAGAGGAGATGTTTCGATTCTCTCACCAAGTTCCTAACTACTTCCTATCTGGCCAAGAAGCTCCAAATGCTCCAAAGGGTTGCCGAGAGTTGGATCCAGCCGCTACTCCTTTAGAACTCCTTCAGAACATGACAGAAGCTGATGAGGCATCACTGGATATTGCTTAG 2052 0.4347 MMDCNRDEALRAKEIAERKFSEREYVGAKKFALKALNLYPELEDLSQFLTTLDIYISAENKVSGDLDWYGILGVSPFADDETVRKQYRKLALTLHPDKNKTLGAEGAFKLVSEAWSLLSDKTKRLAYNQKRTGINPNHARSQSDAPGSNGIYNFKKNVTSNVRTGTNARAPSAPAPPPQKRGETFWTICNGCKTHYEYLRVYLNHTLLCPNCNEAFMAVERGPPPNVSKSPNWSSQKNQHTRHHAGTNNTNAQWDSHRSSSVAAQIVQQASEKVKREAAPSFSEWERKRTDGLKKRRTDDIHINGYQGHVANRMGMGHGAAGAGSFSESGKANMGIQRNYGFSGVTGKHYSTRELSMFELRNMLMDKAKSDIRKKLQQWRSVAEAKDTNKDRGNKRQKSTFNDKASSEKHVESTDNGHKRLVIDSFPVTSDDAVKKSQAYITINVPDPDFHNFDLDRSENAFEDDQVWAAYDDDDGMPRYYARIHKVISTNPFRMQISWLNSRSNSELGPIDWIGSGFYKTCGDFRAGKHEPSESLNSFSHKVRWTKGNRGVIRIFPGKGEVWALYRNWSSDWDERTPDEVIHKYDMVEVLEDFNEEQGIVVTPLVKVAGFRTVFQRHMDPDKVRRIRKEEMFRFSHQVPNYFLSGQEAPNAPKGCRELDPAATPLELLQNMTEADEASLDIA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0478 683 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lal4g0478 683 MobiDBLite consensus disorder prediction 224 254 - -
Lal4g0478 683 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lal4g0478 683 MobiDBLite consensus disorder prediction 227 254 - -
Lal4g0478 683 MobiDBLite consensus disorder prediction 277 293 - -
Lal4g0478 683 MobiDBLite consensus disorder prediction 273 293 - -
Lal4g0478 683 CDD DnaJ 67 120 IPR001623 -
Lal4g0478 683 SMART dnaj_3 66 123 IPR001623 -
Lal4g0478 683 Gene3D DnaJ domain 65 170 IPR036869 -
Lal4g0478 683 MobiDBLite consensus disorder prediction 380 418 - -
Lal4g0478 683 Pfam Domain of unknown function (DUF3444) 442 648 IPR024593 -
Lal4g0478 683 PANTHER BNAC03G44070D PROTEIN 2 677 - -
Lal4g0478 683 Pfam DnaJ domain 67 128 IPR001623 -
Lal4g0478 683 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal4g0478 683 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lal4g0478 683 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lal4g0478 683 PANTHER HEAT SHOCK PROTEIN-LIKE 2 677 - -
Lal4g0478 683 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Lal4g0478 683 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0478 Lal-Chr4 3393093 3395144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0478 5 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 3.51e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0478 - - lang:109326882 1320.06