Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0449 ATGGTGCCTCCGGGGCCACCCACTCATATTGGTGGTGCTCAGTCTGTCAATGCTTCTCTTTTGAGATCAAATTCAGGGATGTTAGGAGGTCAAGGGGGTCCAATGCCTTCACAAAATTCTTTCCCTTCGCTCGTATCGCCACGTACTCAGTTCAACAATATGAACATTCTAGGAAATATGTCCAATATAACTTCCATGCTGAATCAATCTTTCCCAAATGTAGTTGCAAATCATGGGCTCTCTAGTTCAGGAAGTACCCAGCGTGGAGTGATTGATACTGGAGCTGAGACAGATCCGCTCTCCGGTGTTGGCAATGGAATGAACTTCAGTAATTCTTCATCCTCGTTTGTACAAGCAAATGTGGTGAATGCTGGTGGTTCTTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTGGTAATCAACTGTTGTCTGGTCAACCGCATTCCCAACAGCTTGAACCTCAAAATTTCCAACATATTCAGCAGTCAGTGCAGCAGTTCTCTGCTCCTCTGAATACACAGCAGCAGCATTATCAATCAATTCGAGGAGGGATAGGTGGTATGGGCCCAGTGAAGTTGGAGCCCCAAGTAAATAATGATCAACTTGGACAGCAGCAGCAACAGCAGTTGCAATCATTGAGGAGTCTTCCTCCAGTGAAATTGGAACTGCCTCAACTTCAAACAATGAGAGGTCTTCCACCAGTTAAAATGGAGCCTCAACATTCTGATCAACCATTATTTTTGCATCAGCAGCAGCAACAACAGCAATTCCTCCACATGTCAAGGCAACCATCTCAGGCTTCTGCCGCTCAGTTTAATCTTTTGAACCAACATAGGATTTTGCAATTACAGCAACACCAGCAGCAACAACTCTTGAAGGCAATGCCTCAACAACGGCCTCAACTACCACAACAATTTCAACAGCAGCAGAATATGCCTATAAGGTCTCCCGTGAAACCAGTATATGAACCTGGGATGTGTGCTAGGCGGCTGACAAATTACATGTATCAGCAACAGCATAGGCCTGAAGATAACAATATTGAGTTCTGGAGGAAGTTTGTTGCAGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTTTGTATGGAAGTGGCAGACAAACAAATGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGCAATCACAAACCAGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTGCTTTATGTTGACATGCCACGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAACATCTTCGTGTTGTTCGTGATGGTCAACTTCGAATCGTTTTTTCTCAAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTACTCAAAAATACCAGTCTTTTACTCAAAGTGCTACACCAAATATATCTGTTTCGGAGTTACAAAATAATTGCAATACGTTTGTTTCTTCAGCCCGTCAGTTGGCTAAAGCTTTAGAAGTTCCTCTAGTTAATGATTTAGGATATACAAAGAGATACGTGCGCTGCCTCCAGATTTCGGAAGTTGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACTGGGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTAGGAGAAATAGTGGTTCCACTGGACCTCGTGGTCAAGCACAACAGCACGAAGATCAACAACAACAACAACAACAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAACAACAACAGCAGCAGCAACAACAGCAGCAGCAAATGTTGGCCCGTAACTCAAATGGTGATCAAACTTCATCACAAGGCACTGCCATGCAATTTGCTTCCAACAATGGTATGGTTAATGTAAATAACTCCATTAACACAGCATCTGCATCAACCACCACAAGCACTATCGTCGGACTGCTCCACCAAAACTCCATGAATTCTAGAAAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGGTTCCATCCCCAGGTTCCTCCAGCACTATGCCACAGGTCCAACCAAACTCATCCCCTTTTCAAGCACCAACACCATCTTCATCTAACAACCTGCAACAAACATGTCACCATTCCTTAACATCTGCCAATCACATGGGTACAGCAAACTCACCGGCTAATATTTCCATGCAACAACATCAGCCATCTCTTTCTGGTGAGGCCGACCCGACCGACGCTCAGAGCTCAGTCCAGAAAATCATACATGAGATGATGTTGTCGTCCCAGATGAACGGCACAGGCGAGATGGTTGGTGTTGCTTCTCTTGGAAATGGTATGAAGAATGTAAACGGTGTTCTGCCAACTCGCACTAATACAGGGCTGAACAGTGGCAATGGTGCACTGAATAGTAATTCAGGTGCTGGGATTAGTAGTTATGGGACAATGAACCTTGGTCAATCTGTTATGGCTAATGGAATGAGGGCTTCTATGGGAAATAACTCAGTCATGAATGGAAGGGGAGGAATGGCGTTCATCGCAAGGGATCAAGCTATGAATCATCAACAAGATTTGTCAAATCAACTACTTAGCGGGCTAGGAACTGTAAACAGTTTTAATAATCTGCAATTTGATTGGAAACCATCTCCATGA 2772 0.439 MVPPGPPTHIGGAQSVNASLLRSNSGMLGGQGGPMPSQNSFPSLVSPRTQFNNMNILGNMSNITSMLNQSFPNVVANHGLSSSGSTQRGVIDTGAETDPLSGVGNGMNFSNSSSSFVQANVVNAGGSSGQGQGQQFSNPSGNQLLSGQPHSQQLEPQNFQHIQQSVQQFSAPLNTQQQHYQSIRGGIGGMGPVKLEPQVNNDQLGQQQQQQLQSLRSLPPVKLELPQLQTMRGLPPVKMEPQHSDQPLFLHQQQQQQQFLHMSRQPSQASAAQFNLLNQHRILQLQQHQQQQLLKAMPQQRPQLPQQFQQQQNMPIRSPVKPVYEPGMCARRLTNYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTNGVFPQDVWHCEICNHKPGRGFEATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEHLRVVRDGQLRIVFSQDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVTQKYQSFTQSATPNISVSELQNNCNTFVSSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRNSGSTGPRGQAQQHEDQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQMLARNSNGDQTSSQGTAMQFASNNGMVNVNNSINTASASTTTSTIVGLLHQNSMNSRKNSMNNASSPYGGSSVQVPSPGSSSTMPQVQPNSSPFQAPTPSSSNNLQQTCHHSLTSANHMGTANSPANISMQQHQPSLSGEADPTDAQSSVQKIIHEMMLSSQMNGTGEMVGVASLGNGMKNVNGVLPTRTNTGLNSGNGALNSNSGAGISSYGTMNLGQSVMANGMRASMGNNSVMNGRGGMAFIARDQAMNHQQDLSNQLLSGLGTVNSFNNLQFDWKPSP 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0449 923 MobiDBLite consensus disorder prediction 23 46 - -
Lal4g0449 923 MobiDBLite consensus disorder prediction 576 615 - -
Lal4g0449 923 Coils Coil 603 641 - -
Lal4g0449 923 PANTHER LIM DOMAIN-BINDING PROTEIN 1 922 IPR029005 -
Lal4g0449 923 MobiDBLite consensus disorder prediction 696 790 - -
Lal4g0449 923 MobiDBLite consensus disorder prediction 122 154 - -
Lal4g0449 923 MobiDBLite consensus disorder prediction 80 107 - -
Lal4g0449 923 MobiDBLite consensus disorder prediction 590 615 - -
Lal4g0449 923 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 922 - -
Lal4g0449 923 Pfam LIM-domain binding protein 332 586 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0449 Lal-Chr4 3135113 3145840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0449 1 919 C2H2 Transcription Factor Family AT1G43850 58.774 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0449 - - gmx:100787573 1305.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0449 4 3135113 3145840 Lal4g0449 4 3135113 3145840 ECH
Lal21g0541 21 3938487 3947144 Lal4g0449 4 3135113 3145840 LSH