Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0443 ATGTTTATTTTTGCCATACAGAAGTCGATGGAAGAAGAACTGAACGTGAATAATGAAACACTAGAGGGATTAGATGACTGTAATGTTAGTGAAGAAGAAAATGTGAATGAAATAGAGGGGTTAAATTTTGAAGAGATTGATTTTCGATTACTAAACGAAGATGAAGTGAAAAAATATAGGTTTTTAGACAATGAAATTGCATACAAATTTTATAAGATGTATGGTTTGAAGAAAGGATTTGGCATTAGAAAATATAATACTCGGAGAGACAAGGATGGTGAGATTTTGTGGCAATCCTTTTTTTGTGATAGAGAAGGATTTAGAGATAAAAAAAATGATCTGATTCGGAAGAGGGCGCCTAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAAGGAGAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAACTCGTTGGTGAATATTATGGTGCGATGATAGCTTCCAACCGAAGAATGACAGAGACAGATGTGGCTCAGATGAACACAATGAGAGAAGTGGGTATTGGGACAGGAAAGATATTTGGGTCTTTTGCTGGTCAATGTGGGGGTTATCAATATATTGGGTTTTCTAAGAAAGACATGTATAATGAAATCCAGAAGCAAAGAAAAATTGGAAATGGAGATGCGGAAACTGCATTACAATACCTAAAGGAGCAATCAAAATCAGATTGTGCAATGTATTGGAGGCATAGTGTAGATGAAGAATGTAAGTTGCAACAATTATTTTGGGCAGATGGATGTAGTATTTTTGACTACTCAATTTTTGGAGATGTTCTTGCTTTTGATGCAACTTATGGTCGAAACAAATATAAGTTTCCAGTTGTTATATTTTCTGGTGTTAATCATCACAAACAAACAACTGTGTTTGCTGCTGCTGTTGTGTCAAATGAGACAGAGGAAACATACGTTTGGCTTTTGGAGAAATTTTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATAACTGATGGTGATTTGTCCATGAAGAATGCAATTAGAAGAGTTTTTCCCGAAGTCCATCATAGGTTGTGTGCTTGGCATATTTGTAACAACGCTGGAAAAAATATAAAAAAAAAGAATTTTCATAAGGATTTCCAAAAAGTGATGTATGCGGATGTAGAGATTGAAGATTTTAATATGATGTGGGAGGAACTTATTAACAAGCATGGACTACATAACAATGCATGGGTGGCTCAGATTTTTGATTGTAGAAGTATGTGGGCGAGGTCTTACATTCGGGGAAAGTTCTATGCTGGTCTGCATACTACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGGTATATAGAATCTGGGTATAACGTTACTGAATTTCTCCATCACTTTCAACGATGTCTAAGTCACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCATATGGTGATGAGTTGTTACAAACTCCTTATCATAATTTAGAGGGTTATGCTGCTTCGATATATACTAGAGCTGTTTTCAAAGAATTTCGTGAAGTGTTGTTGGAAGCTGCAAAGTTGAGGATAATTTCTACCCAGCAAACCTCGAGTCATGTAATATACAAGATTGGAAAGCATTATTGTCCTAATAAGAAATGGCATGTATCACATTTTGACAATGGTACTAACGTGGACATTAAATGTTCTTGTAAAAGAATGGAATCTTTTGGGATGCCATGTAGTCATTCTGTTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTTGATAGATGGACAAAGAAAGCAAAGGATGTTCAACGTCTAAATTTTCAGCAATGTGACCTAAGCAAAGAATCAGTTGAAAGTAGTAGATATGGAGCTTTGAGTGATGGTTGTAGAGTGTTATGTAACTTTGCTTGCAAAACAGAGGAGGATTTTACTGAGATGTTGGAAAAAATATATAACGAATGTAGTAGACTGCGATTGAAACAACAGTCTAGTGAAATGGAAAATGTTGAAAATGATACTGAAGAGCAAGTACGAGATCCAATTCGAGTACGTGCTAAAGGGCGAGCACCTGGGATGACCACAAAAGGTAAGCGGGGTAATCAGTGCGGTATTTGTCGTGAAATTGGCCACAATAGAGCAAGTTGTCCAAATGTTGTTGGTAGTTGTAGTCGTATTTTCGATGACGAACAATAG 2223 0.3608 MFIFAIQKSMEEELNVNNETLEGLDDCNVSEEENVNEIEGLNFEEIDFRLLNEDEVKKYRFLDNEIAYKFYKMYGLKKGFGIRKYNTRRDKDGEILWQSFFCDREGFRDKKNDLIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSYFVDEHNHELVGEYYGAMIASNRRMTETDVAQMNTMREVGIGTGKIFGSFAGQCGGYQYIGFSKKDMYNEIQKQRKIGNGDAETALQYLKEQSKSDCAMYWRHSVDEECKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAAVVSNETEETYVWLLEKFLEAMNGKHPKCVITDGDLSMKNAIRRVFPEVHHRLCAWHICNNAGKNIKKKNFHKDFQKVMYADVEIEDFNMMWEELINKHGLHNNAWVAQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYIESGYNVTEFLHHFQRCLSHMRNNEVMEDFKSSYGDELLQTPYHNLEGYAASIYTRAVFKEFREVLLEAAKLRIISTQQTSSHVIYKIGKHYCPNKKWHVSHFDNGTNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLPSCLVLDRWTKKAKDVQRLNFQQCDLSKESVESSRYGALSDGCRVLCNFACKTEEDFTEMLEKIYNECSRLRLKQQSSEMENVENDTEEQVRDPIRVRAKGRAPGMTTKGKRGNQCGICREIGHNRASCPNVVGSCSRIFDDEQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0443 740 Pfam MULE transposase domain 277 371 IPR018289 -
Lal4g0443 740 ProSiteProfiles Zinc finger SWIM-type profile. 554 592 IPR007527 GO:0008270
Lal4g0443 740 Coils Coil 662 689 - -
Lal4g0443 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 665 IPR031052 GO:0006355
Lal4g0443 740 Pfam FAR1 DNA-binding domain 69 157 IPR004330 -
Lal4g0443 740 PANTHER OS02G0262500 PROTEIN 60 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0443 Lal-Chr4 3096596 3099255 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal4g0443 MULE 3.9e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0443 - - lang:109350553 668.692