Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0436 ATGCCACCTCGCCGGTGTAATCACCCACTCAACCCGGCGTCATACTCCGACGACAGCGAAACCGACGATTACGACGACGAAGAAGAAGAATTGAACTGCACAATGCGATGTATCTCTTGCGAAGAGGATTATGATCCTGATGATGCTGGAACATGCAAAGAGTGTTACGAAGAAGCCAATGAGATTGAAGAAGAGTATAAGCGTGAAATTGAAGAGTTGAAGGCTAAGGTTAACTTTCTTAAACTCTCTTACCCTGTTGAACCCAATGGTCACTCCAACCCTTATGCTCTTACTCACACTGATGTTGTACTCATTCCTTATGGTGATTCCTCTTCTGGATCTGTTCATGCTCATAAGGCTATTTTGGTGAGTCGATCTCCAGTTTTTAAAGCAATGCTCGAGAATGATATGGAGGAAAGTCGAAGTGGCATTATAAAGATCGACGATGTATCTTATGATGCTCTTAGTGCCTTTGTCAACTATTTATACACTGCTGAAACATGCCTTGACGATCAAATGGCTTTTGATCTCTTAGTTTTGGCAGAAAAGTATGAGGTGAAGCATCTCAAGGCATTCTGCGAGAAGTTTTTGATATCTGGATTGAACTTGGATAAAGCTATCGCAAACTATGCGTTCGCGCACCAACACAATGCCAAACAATTACAAGATTCTGCATTGGCATTGATTATAGACAACATGGACAGGTTCACCAGGTGTGAAGAGTATGCAGATTTGAAAGACACTAATCCTCGTGTTGTTGTGGAAATTTTTGAAGCTTATCTTGCCAAACAGGTTAATACCGCTTCTCCCTTGAAGCTATAA 822 0.4173 MPPRRCNHPLNPASYSDDSETDDYDDEEEELNCTMRCISCEEDYDPDDAGTCKECYEEANEIEEEYKREIEELKAKVNFLKLSYPVEPNGHSNPYALTHTDVVLIPYGDSSSGSVHAHKAILVSRSPVFKAMLENDMEESRSGIIKIDDVSYDALSAFVNYLYTAETCLDDQMAFDLLVLAEKYEVKHLKAFCEKFLISGLNLDKAIANYAFAHQHNAKQLQDSALALIIDNMDRFTRCEEYADLKDTNPRVVVEIFEAYLAKQVNTASPLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0436 273 SMART BTB_4 100 201 IPR000210 GO:0005515
Lal4g0436 273 CDD BACK 210 245 - -
Lal4g0436 273 CDD BTB_POZ_ZBTB_KLHL-like 99 184 - -
Lal4g0436 273 Pfam BTB/POZ domain 109 199 IPR000210 GO:0005515
Lal4g0436 273 Gene3D - 203 272 - -
Lal4g0436 273 Coils Coil 52 83 - -
Lal4g0436 273 MobiDBLite consensus disorder prediction 1 27 - -
Lal4g0436 273 PANTHER SPECKLE-TYPE POZ PROTEIN 33 270 - -
Lal4g0436 273 PANTHER GH01369P 33 270 - -
Lal4g0436 273 SUPERFAMILY POZ domain 99 199 IPR011333 -
Lal4g0436 273 Gene3D Potassium Channel Kv1.1; Chain A 96 202 IPR011333 -
Lal4g0436 273 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0436 Lal-Chr4 3056664 3059258 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal4g0436 BTB 2.6e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0436 K10523 - zju:107421125 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0436 4 3056664 3059258 Lal4g0436 4 3056664 3059258 ECH