Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0432 ATGGGCTCTTGTGGGAATTCGGCTATGGTTGATGATCTCTTAGGTGGGTCTGTTACTGAGCAGCACCTGTGCTCAGAGTTACCGACACAGTGTGTTCCCGTGCAGGAGCCAGCTTCAAAAGAAGCTTGCGATGTGTTGGACTCTAATGTTGATCTCTCTGGCATGTATTCGGCCGGAGAGGGCCACGTGGAATCTGCAAGCTTTGTTAGTGTTGCCGAGGGATCCGGGGGTGCATTGGTCAGTGAATGTAAAAATGCTGATATGTTGCTATTGGAGAATACCTCAGAAGATGATTGTCAGAATCAATCTGGGATGTGTTGTGACGATGTTGAAGTTTCAGGTGTAAAGTGTGGTGGGTTGTGCTCAGAAGGAAATTTTCAAAATGAAGGCAACTTGGACATTCCACCGAAGTTCATAACTGTGATTGGCTTGCAGGAGGATTGTGTTCAACAGGATGAGCATAAGGATGATAAGAGCGATATGTTGGTCTTAGCAGGAGATGATTCAGCAGTCATGGAAGGGAGAAACAATGGCGCTGGTTTACTTGATGATACTTCTAATTGTGTGTCTGATTTCAGTCATTTTGAAATGTCCTTGAAATCAGAACCCATTACTCACTTGCTAGTTGATTGCAATCAGAAAAATGAGCAGAAAGATTTTTTGAGAAATGCAGATCCCATGTCAAAGGTTGTGGGAAAATGTGATGATTTTGGCGGGATGGAAGCTGATGCCTGCAATAAGATTTCTCCTTCACAATTTATGGACCTGCCATCATGTGCATTATATACGAAAGTACCAAGCGCAAGTGATCAGCAACACGATCAGAAGGATGGCGAGGATTGCAATAGTGAAGAAAAGGTTAAAGCTTTTGTTGACATAGAAAACAACTTTATCGATTCAAATGCAATGAAGCACAGACACTTCACAACAGTCTCCTTAGGGAGTTCACCCGTAGTTGATTCACCTTGTGAGCCTACCCTTTTTGGTCAGGGGAGTGAAATGAAGAATAGTTTATGTCAAATAGAAGAAGATAGTTTATGTGAATTGAAGCACTGTCCCACAGAGCAAACTACCAACTGTACCTTTAGGAAACCACTTTATCCTGAAACAGGTCAGCCCTCTGTCATTTTAGTCACCAGCAGCTCTTCAAAGGAAATGCCTGATCCGCTTAACAATGGTGATAATGTTCACATCAATAATAATGCTGTCAGCAATCCTGAACAGGCAGATATTGTTGAAGCTGACTGTACCGCTGAAAGAATACGGTTGCCTTCTCAAAGGAATAGTCGAAGTACAAAACTTGGTCGCAAGACACAATCCAAAAACGCTTCTAGAAAATGCAAGAACAATGCCAATGCGACACATCCAGATGGGTGTACGGATGTTATGTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTATCTCCAAACCAGCTCGTTCCTCTATGTGGGGATTGCTTGGGAACGTTGAACAATTTTTTGAGCAAGATAGTGAGGTTGGGGTCAGTGAAGCCATGAGCCAAGAATTGGGCAAGGCTAGAAGAAAACGTCAAAGTGGCAAAGTGATTAAAAATGGTGCAAGTTCTAGCTCATTGAATTCAGTGCAGAAGTGTTATGCTTCAACTACTCGTGTTCGGTTGAGGGTCAGGATTGGGAAAGAAATTGATTTAAGTCGCTCACATGTTTTGATTCCTGAGGCTTTTGATAGCTTGGCTTCTTCTTCCCACTTGGGGTCTGGTTTGGGTTCACAGAAACTAGCCAACAATGCCGAAGGTAATATTTCTGAAGTGGTTGCTTTAGGCAAGTTAGGAACTTTCAAAAATGAGCCGGACACCGATGCTATTGTTCTAAATGCACAAACTATAACAGAGAAATCAGATGGGGATGCAGATGGTTCATGTCTTTTGGTTCCTCCACAGATAGGGGTTGAAGCATTGATTGAGCCAATCAATAATAAGGGTATGAATCCTGGAACTTCACCTGATTCAGAAGTTATCAATACAATTCCGGAAGACCAGGTTGGAGAAGGACATCAAGAAGATTTACATCATGCTATTTTAGGTTCCTCTAAAGAGTTCAATTCTATTTTGGATTTTAACATCACCAAGAGAGGGAAGAAGAAAGACAAGCTTATCTGGTCAAAGGATTGTATACCTGAAGACGGATCACAAGGTCTTCCAAGGAATAATAGAGCTAAGAATTCAAAGAATCGTAGACATAAGAAGAATTTCAGTGATGCTGTTTGCTCTTCGGAATTGCCTACTTCCACTGAAATAAATGCTTCAAGGAAATCTGAAAGCTGTAAAGAATTGTCCACAGAACCATGGCCTGTTTCTGGAGAGATTGAACTCGAAGGCTCCACTGAGGCTTTGAAGGTTAACATGGAAAGTAAGACAATTTGCAATCCATCTGTTGACAATGTGTTTTCAGAATCCCAGGCTTCCGAGAATTTGCTATCGTCTGCAAGATCTTCGGGCCATAAACTTCCTAAAAGTCTTTTACCAAGTAAAGTTGGCAAGACCAAATCTAAAGCTTCTGACTCAACAAGCAAGAAAAAGACTACTTATAGATGCAATGAGAAACAAAAACAGTCAACTAAGAAGAGTGGAGTCAAGCGAAAAGGTATTTCGTCTAAAGTTAAGTGTGAAGTGGAAGATCACCCACACACAGACGAAAACATTGTTGAAAATCACAAGTTGGATGCTGTTGGAGAAGTTAATGCCGGTGAAAACTTAGTGTCAATCAATGTATCTAATTTGGACGTGGTACCTGGTGTTGGTTTGGGAGAGCAGCTATCACCACGTAATGCATGGGTGCGTTGCGATGATTGTCACAAATGGCGACGTATTCCAGCTGTGCTTGCAGACTTAATTAATGAAACAAATGGAACCTGGACATGTAATGACAACGGTGATAAAGCCTTTGCTGATTGCACTATCCCTCAGGAAATGTCAAATGCAGAGATTAATTTTGAGTTGGGAATATCGGATGAAGAAGATGCTTATGAAGACTCCAAAAATTATAAGCAGTTGGAATATCGACAGTCATCGGTTTCCCAGGAGTCAACCTTTTCCCGTATCTTCACCAATGAGTTTCTGCATCGTAGCCATAAAACTCAGACTATTGATGAGGTAATGGTCTGCCATTGCAAGCCACCTCAAGAAGGCAAGTTGGGCTGTGGGGATGAATGTCTAAACCGGATGCTTAACATTGAATGTGTGAAAGGAACCTGCCCATGTGGGGATCGTTGTTCCAATCAGCAGTTCCAAAAGCGCGAGTATGCCAGCCTGAATTGGTTTAAATGTGGGAAAAAGGGTTATGGGCTGAAGGCACTGGAGGATATAGCTGAAGGCCAGTTTCTGATTGAATATGTTGGAGAGGTGCTTGATATGCATGCTTATGAGGCACGACAAAGGGAGTATGCATTGAAGGGTCATAGACATTTCTATTTTATGACCTTAAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGAACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTTTTTGCATCGAAGGACATCAAACAGGATGAAGAAGTGACATTTGATTACAACTATGTAAGGGTTTTCGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCTCTCCATTGTCGAGGTTATATAGGTGGTGATCCACTTGATGAAGAAGTGATAGTTCAAGGTGATTCAGATGAAGAATTTCCTGAACCTGTGATGGTTACTAAAGATGGTGAAATAAAGAACAGTGTGGCGACACAGTCTGCTAGGCACATGTTAAAAGACAGGTATGTATTGAACCAGTTTACAACTTTTTTAGATGTAGATGGTACTCAAGACAAGGAGATTTGTATGAATCCTACCTCTGCTGTTTCCCCATTGCACAGACCATCACAAATGGAAGTCTCAAAGCACAGGTCTTCTGTTCGAGCACAAGAAATATCTCAACAAACGAAGGATATGACAGACAAAGCCATGCCTGATGTGCAACCAGGATATGCAATGGAATCAGATCTTGCAGACAATAAGTGCCAGACTCAACAATTAGAGTTTACTTCCCCTACAAATGTCAGCAAAGTGCTACCGAACTCTACTGGTAGTAAGAGGGAATCACATATGCGTGTGAGGGCTCCTAAACCAAGTGGTTCTGTTAAAAAGGGTAAGACTTGTGCTAATCCTCCAGATGCCCTCAAAGCTGGGATAGTCAACCAATCCCAGTTGTCATCTATCAAATTCAAAAAAGTGGTTGAAGGAAATCCAAATGGCCGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGAGTAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAACTTTTGCTTCTCACTGTGGCATCAGGTGATAGGAGCAATGGTGAAGCAATCCAGAGCAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAACAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACACAAAATAATGAAGCAGTATGGGCAGGACTTCAAAAAGATTCCAATACTACGAAAGCTTCTGAAGGTCATAGAGTACCTAATAACAGGCAATATATTGACATTTGAACATATCAGTAGCGGGCCCCCTTGTCATGGAATGGAGAGCTTTAGGGAATCAATGTTGTCTTTGACAGAACATGACGACAAACAGGTCCATCAAATTGCCCGAAACTTCCGAGACAGATGGTTTCCTAGACATGTCAGAAAACATCATATGGACAGGGATGGTAATAGGGTGGAATCTCACAGAAGCTTCTACTCTAACAGATTTTCAGCATCACAAAACCATCAGCATGAGCAGGATTTAAGACCAATAGAAGCAATTGATCGTGTTCATCAGTCAACGCCCGTGACAACTTCAGTAGGCAATGTTCCCCAGGAAGGCTGCTCTCCACTATCTCAGGATGGTATTGAAAACAAAGGGACAAAACAACGTAAGCGCAAAAGCCGATGGGATCAACCAGCAGAAACAAATTCATTTCCCAATACAGTTATTGGCTCTAATCATGGAAGCCGGAGCACTCAGGAGGATGTTCCACCAGGGTTTCCATGTCTAGTAGGTTCATTACCCGATCCACTGAAATCGGGTTTTCCTTCTTCACAAAATGCGAGCCATACAGGATGTTCCTCTGATTCAATCATTGTTCATCCAAAGGAGAAATTTAACTCTGGCTTGCCTGTCATGTATGGAATGCCATTGTCTGTTGTCCAGCAATACGGAACACCTCATGCTGAAATCACAGAGAGTTGGGTCACTGCACCTGGCATGACTTTCAACTCATTTCCTCCATTACCCTCGTACCCGCGTGATGAGAAAAACTTCCGCCCTTCTAATTCTGCTAATGCTATGTCAATTGATCAGCTTGCTGAAGTTAGACAGTGTGATGCCAGTGGTCCAAGTATTTGTACCTCAGATGATATGGTTCCCAGGACAATTGGTGCTAACCCTGATGACATAAACCTTCCATCGGAAGAAAATGAACACATATCTAAACGATTGAAGGGTGACTCCTGTGACTTAGGAGCGAATTACTTTAGACAGCAGAAATGGAATAACTCGAAAATACATCGACCATGGTTCAGAAGGAATGCATGGAAATGTGATGTGAAGTTGAACAACTCCAGTGATGTCTGCAGTATAGGTGTAGATGTACCAGAAGAGTCAAATGGTGCATGTCATTCTGAGGATGCAAGCCAATAA 5808 0.4206 MGSCGNSAMVDDLLGGSVTEQHLCSELPTQCVPVQEPASKEACDVLDSNVDLSGMYSAGEGHVESASFVSVAEGSGGALVSECKNADMLLLENTSEDDCQNQSGMCCDDVEVSGVKCGGLCSEGNFQNEGNLDIPPKFITVIGLQEDCVQQDEHKDDKSDMLVLAGDDSAVMEGRNNGAGLLDDTSNCVSDFSHFEMSLKSEPITHLLVDCNQKNEQKDFLRNADPMSKVVGKCDDFGGMEADACNKISPSQFMDLPSCALYTKVPSASDQQHDQKDGEDCNSEEKVKAFVDIENNFIDSNAMKHRHFTTVSLGSSPVVDSPCEPTLFGQGSEMKNSLCQIEEDSLCELKHCPTEQTTNCTFRKPLYPETGQPSVILVTSSSSKEMPDPLNNGDNVHINNNAVSNPEQADIVEADCTAERIRLPSQRNSRSTKLGRKTQSKNASRKCKNNANATHPDGCTDVMLEAARKKRSCISKPARSSMWGLLGNVEQFFEQDSEVGVSEAMSQELGKARRKRQSGKVIKNGASSSSLNSVQKCYASTTRVRLRVRIGKEIDLSRSHVLIPEAFDSLASSSHLGSGLGSQKLANNAEGNISEVVALGKLGTFKNEPDTDAIVLNAQTITEKSDGDADGSCLLVPPQIGVEALIEPINNKGMNPGTSPDSEVINTIPEDQVGEGHQEDLHHAILGSSKEFNSILDFNITKRGKKKDKLIWSKDCIPEDGSQGLPRNNRAKNSKNRRHKKNFSDAVCSSELPTSTEINASRKSESCKELSTEPWPVSGEIELEGSTEALKVNMESKTICNPSVDNVFSESQASENLLSSARSSGHKLPKSLLPSKVGKTKSKASDSTSKKKTTYRCNEKQKQSTKKSGVKRKGISSKVKCEVEDHPHTDENIVENHKLDAVGEVNAGENLVSINVSNLDVVPGVGLGEQLSPRNAWVRCDDCHKWRRIPAVLADLINETNGTWTCNDNGDKAFADCTIPQEMSNAEINFELGISDEEDAYEDSKNYKQLEYRQSSVSQESTFSRIFTNEFLHRSHKTQTIDEVMVCHCKPPQEGKLGCGDECLNRMLNIECVKGTCPCGDRCSNQQFQKREYASLNWFKCGKKGYGLKALEDIAEGQFLIEYVGEVLDMHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFASKDIKQDEEVTFDYNYVRVFGAAAKKCYCGSLHCRGYIGGDPLDEEVIVQGDSDEEFPEPVMVTKDGEIKNSVATQSARHMLKDRYVLNQFTTFLDVDGTQDKEICMNPTSAVSPLHRPSQMEVSKHRSSVRAQEISQQTKDMTDKAMPDVQPGYAMESDLADNKCQTQQLEFTSPTNVSKVLPNSTGSKRESHMRVRAPKPSGSVKKGKTCANPPDALKAGIVNQSQLSSIKFKKVVEGNPNGRFEAVQEKLNELLDGDGGVSKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRTVLNDIINKNGLQMLHKIMKQYGQDFKKIPILRKLLKVIEYLITGNILTFEHISSGPPCHGMESFRESMLSLTEHDDKQVHQIARNFRDRWFPRHVRKHHMDRDGNRVESHRSFYSNRFSASQNHQHEQDLRPIEAIDRVHQSTPVTTSVGNVPQEGCSPLSQDGIENKGTKQRKRKSRWDQPAETNSFPNTVIGSNHGSRSTQEDVPPGFPCLVGSLPDPLKSGFPSSQNASHTGCSSDSIIVHPKEKFNSGLPVMYGMPLSVVQQYGTPHAEITESWVTAPGMTFNSFPPLPSYPRDEKNFRPSNSANAMSIDQLAEVRQCDASGPSICTSDDMVPRTIGANPDDINLPSEENEHISKRLKGDSCDLGANYFRQQKWNNSKIHRPWFRRNAWKCDVKLNNSSDVCSIGVDVPEESNGACHSEDASQ 1935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0432 1935 Pfam AWS domain 1057 1091 IPR006560 GO:0005634|GO:0018024
Lal4g0432 1935 SUPERFAMILY SET domain 1032 1232 IPR046341 -
Lal4g0432 1935 ProSiteProfiles Post-SET domain profile. 1219 1235 IPR003616 -
Lal4g0432 1935 Pfam CW-type Zinc Finger 937 982 IPR011124 GO:0008270
Lal4g0432 1935 ProSiteProfiles AWS domain profile. 1042 1092 IPR006560 GO:0005634|GO:0018024
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1651 1717 - -
Lal4g0432 1935 Gene3D - 928 989 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1651 1674 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1327 1341 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1306 1349 - -
Lal4g0432 1935 ProSiteProfiles Zinc finger CW-type profile. 931 985 IPR011124 GO:0008270
Lal4g0432 1935 CDD SET_SETD2 1093 1235 IPR044437 GO:0010452|GO:0046975
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1367 1386 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 818 877 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1690 1711 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 422 456 - -
Lal4g0432 1935 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 429 1870 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 717 746 - -
Lal4g0432 1935 SMART set_7 1094 1217 IPR001214 GO:0005515
Lal4g0432 1935 Pfam SET domain 1105 1211 IPR001214 GO:0005515
Lal4g0432 1935 SMART shorttest3 1042 1093 IPR006560 GO:0005634|GO:0018024
Lal4g0432 1935 MobiDBLite consensus disorder prediction 843 865 - -
Lal4g0432 1935 SMART PostSET_3 1219 1235 IPR003616 -
Lal4g0432 1935 ProSiteProfiles SET domain profile. 1094 1211 IPR001214 GO:0005515
Lal4g0432 1935 Gene3D SET domain 990 1249 IPR046341 -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 1367 1408 - -
Lal4g0432 1935 PANTHER SET DOMAIN PROTEINS 429 1870 - -
Lal4g0432 1935 MobiDBLite consensus disorder prediction 422 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0432 Lal-Chr4 3018454 3033107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0432 1071 1234 C2H2 Transcription Factor Family AT2G23740 34.225 2.75e-20 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal4g0432 SET 3.1e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0432 4 3018454 3033107 Lal4g0432 4 3018454 3033107 ECH
Lal17g0500 17 3464394 3478440 Lal4g0432 4 3018454 3033107 LSH
Lal21g0531 21 3852890 3866515 Lal4g0432 4 3018454 3033107 LSH