Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0428 ATGAATCGTGGTTCGTCTTTTTCTTCATCAACTACATCATCTATGGCGAAGCGTCGTGCATCAAACTCAGAAAATATCAACATTAAGAAGCGTTCTCCTCTTACTAACCTCACTAATCACATTCCTTCTCGCAATTCATCATCCACTTTGGTACCATGTGTTACTAAAGTATCCAAGGCCAAGAAAGAGCCTCTACCATGCACCACTAGTTCAGCAACTTCTTGCAATAAACTACCCTCTTTGGCAAAAGTTCAATCAACTTCAACTTTTTTTCCAAAGGCTACTCCTTTACCTCAAAGGGATGAGGATTCTCCAACAGTTGCAACTGTTACTGTTCCTCTTGTTTCAATCAGCAGCATGGATATTTCTCCAACAAAATCAGATGAAATCTCAGTTTCTGGGTCAATGTCTTCATGTCATTCTTTCAAGAGCCCTGAAATTGAGTATCTTGACAACACTGATATTTCAACAGTTGATTCCATTCAGAGGAAGACTTTCACCAATCTCAACATCTCTGATACAACAGAGCCAGAAGGAAACATATGCAGTAGAGACATACTTGATGAGTTTGAAAAAGAGGACAAAATTATCAATGTTGATAACAATTACAAGGACCCTCAGCTTTGTGCAACCTTTGCTTGTGACATCTACAAGCACCTACGTGCAACTGAGGTAAAGAAAAGGCCATCTATAGACTTCATGGAGAAAATTCAGAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGATTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTTGTACCTGATACATTGTATTTGACAGTGAACTACATAGATAGGTATCTTTCAGGGAATGTGATGAATAGGCAAAGGTTACAATTACTTGGTGTTGCCTCTATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTGTGGTAGAGGAATTTTGCTACATAACTGATAACACTTACTTCAAAGAAGAGGTTTTAGAGATGGAATCTGCTGTCTTGAATTTTCTGAAGTTTGAAATGACAGCCCCAACAATTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTCACTGAGACCCCTTCACTACAACTAGAGTGTTTGACAAACTATATTGCGGAATTGTCTCTCTTGGAGTACAATATGCTTTGTTATGCTCCATCACTTGTAGCTGCTTCTGCAATTTTCCTGGCCAAATTTATACTTTTCCCTTCAATGAAACCTTGGAATTCTACATTGCAGCATTACACGCTTTACCATCCTTCTGATTTGTGTGATTGTGTAACGGATCTCCATCGTCTTTGTTGCGGCAGCCCTAATTCTAATTTGCCTGCAATTAGGGAGAAATACAACCAGCATAAGTACAAATATGTGGCCAAGAAGCACTGTCCTCCTTCAATACCACCAGAATTTTTCCAGAATTAA 1434 0.3926 MNRGSSFSSSTTSSMAKRRASNSENINIKKRSPLTNLTNHIPSRNSSSTLVPCVTKVSKAKKEPLPCTTSSATSCNKLPSLAKVQSTSTFFPKATPLPQRDEDSPTVATVTVPLVSISSMDISPTKSDEISVSGSMSSCHSFKSPEIEYLDNTDISTVDSIQRKTFTNLNISDTTEPEGNICSRDILDEFEKEDKIINVDNNYKDPQLCATFACDIYKHLRATEVKKRPSIDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPVVEEFCYITDNTYFKEEVLEMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVTETPSLQLECLTNYIAELSLLEYNMLCYAPSLVAASAIFLAKFILFPSMKPWNSTLQHYTLYHPSDLCDCVTDLHRLCCGSPNSNLPAIREKYNQHKYKYVAKKHCPPSIPPEFFQN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0428 477 Pfam Cyclin, N-terminal domain 215 341 IPR006671 -
Lal4g0428 477 PANTHER CYCLINS 21 476 IPR039361 -
Lal4g0428 477 ProSitePatterns Cyclins signature. 246 277 IPR006671 -
Lal4g0428 477 Gene3D - 215 463 - -
Lal4g0428 477 MobiDBLite consensus disorder prediction 1 48 - -
Lal4g0428 477 CDD CYCLIN 342 435 IPR013763 -
Lal4g0428 477 PANTHER CYCLIN-A1-1 21 476 - -
Lal4g0428 477 SUPERFAMILY Cyclin-like 204 341 IPR036915 -
Lal4g0428 477 Pfam Cyclin, C-terminal domain 344 465 IPR004367 -
Lal4g0428 477 Gene3D - 229 342 - -
Lal4g0428 477 SMART Cyclin_C_2 344 467 IPR004367 -
Lal4g0428 477 SMART cyclin_7 251 335 IPR013763 -
Lal4g0428 477 SMART cyclin_7 348 436 IPR013763 -
Lal4g0428 477 CDD CYCLIN 245 334 IPR013763 -
Lal4g0428 477 PIRSF Cyclin_A_B_D_E 4 473 IPR039361 -
Lal4g0428 477 SUPERFAMILY Cyclin-like 344 469 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0428 Lal-Chr4 2975580 2984814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0428 2 477 Core Cell Cycle Gene Families AT1G44110 60.246 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0428 K06627 - gmx:100789565 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0428 4 2975580 2984814 Lal4g0428 4 2975580 2984814 ECH
Lal17g0488 17 3372762 3376655 Lal4g0428 4 2975580 2984814 LSH