Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0427 ATGTTGATGATTATGCAGGATGCATGTAGATACTTTCTGATAGAGAGTGGGCTTGCATTGTTTGTGGCATTTCTAATAAATGTTGCGATAATTTCTGTATCGGGCAGTATTTGTTCAGCTGATAACCTTTCTGAACACAATGTTGATCGTTGTAATGATCTTACCCTTAACAATGCTACATTCCTTCTCAAGAATGTGTTGGGACGGTCCAGCTCAACTATTTATGCCGTAGCATTGTTAGCCTCAGGACAAAGCTCTTCCATCAGTGGAACATATGCAGGCCAATTTATCATGCAGAGTTTCTTGGACTTAAAGATGGAAAAATGGATTAGGAATTTGGTTACTAGGTGCATTGCCATAGCACCTAGCCTTATCGTTTCCATCATCGGTGGATCTTCTGGGGCTAGTCAGCTTATCGTTATTGTATCGATGATTCTTTCTTTTGAGTTACCATTTGCTCTAATTCCACTACTTAAGTTTAGTGGCAGTAGTACCAAAATGGGACCTCACAAGAATTCTATGATTATCACTGTGTTGTCATGGATCCTAGGCTTTGGAATCATCTGTATCAATGTGTACTACCTTATTACTGCTTTCACTGGTTGGCTAATCCATAGCAGTCTATCAAAGGTGGCAATAGTGTTCATTGGAATCATAGCGTTTCTTCTCATGACAGTCTATATTGGCTCAATTCTCTACCTAACCTTCAGAAAAGATACTGTTCAGACATTTATAGAGACAGAGAATGACCCAGGAATTTAA 762 0.3911 MLMIMQDACRYFLIESGLALFVAFLINVAIISVSGSICSADNLSEHNVDRCNDLTLNNATFLLKNVLGRSSSTIYAVALLASGQSSSISGTYAGQFIMQSFLDLKMEKWIRNLVTRCIAIAPSLIVSIIGGSSGASQLIVIVSMILSFELPFALIPLLKFSGSSTKMGPHKNSMIITVLSWILGFGIICINVYYLITAFTGWLIHSSLSKVAIVFIGIIAFLLMTVYIGSILYLTFRKDTVQTFIETENDPGI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0427 253 PRINTS Natural resistance-associated macrophage protein signature 83 102 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal4g0427 253 PRINTS Natural resistance-associated macrophage protein signature 111 128 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal4g0427 253 PRINTS Natural resistance-associated macrophage protein signature 143 162 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal4g0427 253 PANTHER METAL TRANSPORTER NRAMP5 5 250 - -
Lal4g0427 253 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 5 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal4g0427 253 Pfam Natural resistance-associated macrophage protein 7 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0427 Lal-Chr4 2971798 2973185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0427 5 250 Inorganic Solute Cotransporters AT1G80830 58.537 1.67e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0427 K21398 - gmx:100787785 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0427 4 2971798 2973185 Lal4g0427 4 2971798 2973185 ECH
Lal17g0484 17 3342713 3348199 Lal4g0427 4 2971798 2973185 LSH