Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0425 ATGTCAGATTCAAGAGTAGACACCATTGCCAGATTAGCCCAATGGAAAATCGACAACTTTGGACCTTGTTCCTACAAAAAATCTGACCCTTTTAAGGTTGGAATCTGGAACTGGTACTTATCTATAGAGAGGAATAGGTACCTTTACATACATCTTTTTCCAGAACCTTCTCGTGTTTCTAAGGAAAACCCACCTGTTGCTAAGTTCATTCTTCGAGTCTCTAATGCTTCATCTTCCCGCAAGTTTAGTGTTTCTCCTGTTCATGAAAAGGTGCTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTACATTTGTTGGCCGCGTCATTATTGATGTCGAGTTTCTTGACCTGAAGATATCCCCTATGAATGGTGGAGAAGCTAGCTCTGTATGGCCATGTGATGGAAAACTGCAATCCATTGCAGAACAAAGTACTCTCGGTTGCCTCTCCCGGATGCTAGACGAGGCTATACACGCTGACCTAACCATCATCACTGCAGATGGTAATTTGAGAGCTCACAAGGCAATTTTGTCTGCCAGTTCTCCCGTGTTCCAGAGCATGTGTCATCATGACCCGAATAAAAAAGAATCGTCTACAATCCATATAAAAGATATGTCACCTGAATCCTGCATGGCTCTTCTAAGTTACTTGTATGGAACAATCAAACTAGAAGATTTCTGGAAACACCGGCTCACGTTACTTGGAGCAGCCAATAAATATGACATTGGCAGTCTCAAAGATGTGTGCGAGGAAAGCCTAATAGAAGATCTTAACTCCGGAAATGTTCTTGAGAGGCTAAATGAGGCTTGGCTTTATCAACTACACAAGTTGAAGAAAGCATGCTTCACCTTTTTATTCGAATTTGGTAAGATATATGATGTTAGAGATGATATGAACAGCTTTTTTCAGCATGCAGATAGGGAACTAATGCTGGAGATGTTTCAGGAAATTCTTACAATTTGGAAACCAACATAG 981 0.4098 MSDSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKENPPVAKFILRVSNASSSRKFSVSPVHEKVLRTYDDFVWPVDTTFVGRVIIDVEFLDLKISPMNGGEASSVWPCDGKLQSIAEQSTLGCLSRMLDEAIHADLTIITADGNLRAHKAILSASSPVFQSMCHHDPNKKESSTIHIKDMSPESCMALLSYLYGTIKLEDFWKHRLTLLGAANKYDIGSLKDVCEESLIEDLNSGNVLERLNEAWLYQLHKLKKACFTFLFEFGKIYDVRDDMNSFFQHADRELMLEMFQEILTIWKPT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0425 326 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 4 325 - -
Lal4g0425 326 PANTHER OS08G0495500 PROTEIN-RELATED 4 325 IPR044714 -
Lal4g0425 326 CDD MATH 15 101 IPR002083 GO:0005515
Lal4g0425 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Lal4g0425 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Lal4g0425 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Lal4g0425 326 Pfam BTB/POZ domain 154 258 IPR000210 GO:0005515
Lal4g0425 326 Gene3D Potassium Channel Kv1.1; Chain A 137 288 IPR011333 -
Lal4g0425 326 SUPERFAMILY POZ domain 145 257 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0425 Lal-Chr4 2958651 2962417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal4g0425 BTB 1.7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0425 K10523 - rcu:8278000 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0481 17 3313425 3316389 Lal4g0425 4 2958651 2962417 LSH