Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0422 ATGAGCTTAATTCTAAACAACATTGAGATGGAGGTTGTGGATTCTAGAAAGCTACAACATTTTCATGTATTGGCAGTGGATGATAGTGTTATTGATAGGAAACTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACATGTGTAGACTCTGGAGACAAGGCTTTGAAGTATCTTGGTCTGAATCAGGACATTGATAATACTAAGTCCTTAACTTCTATAGAATCATCTTGTCTTCTTCCTCAGCCGTTACAAGAAGAGGGAATGAAAGTGAACTTGATCATGACAGATTATTGCATGCCTGGGATGAGCGGCTATGATTTACTTAAACGAGTCAAGGTCAATAACACAATTCTTCCACAAATTCCTATGTCAATGCATGGATCTTCTTGGAAAGATGTTCCAGTTGTGGTTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCATGGAAGAAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATCTAAAGAAGCTTCAACCATTCTTTATGAAATCCCATGATAATTGTTGTGAACAAGAATCAACTAATAACAGTTCCATAGCTTCAGATAATGACAACTTCATCAACAACAACAAAGATAACATTAGTAATAACAACATTAATAGTGTTAGCAAAAGGAAAGCCACATCACCTGACCCTTCAGAGAGATCAAAACCAAAAATGAAAGGGTTGGAGGTGGCTTAA 729 0.3759 MSLILNNIEMEVVDSRKLQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLNQDIDNTKSLTSIESSCLLPQPLQEEGMKVNLIMTDYCMPGMSGYDLLKRVKVNNTILPQIPMSMHGSSWKDVPVVVMSSENVPSRISMCMEEGAEEFLLKPLQLSDLKKLQPFFMKSHDNCCEQESTNNSSIASDNDNFINNNKDNISNNNINSVSKRKATSPDPSERSKPKMKGLEVA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0422 242 MobiDBLite consensus disorder prediction 224 242 - -
Lal4g0422 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 11 241 - -
Lal4g0422 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 241 IPR045279 GO:0009736
Lal4g0422 242 CDD REC_typeA_ARR 23 173 - -
Lal4g0422 242 MobiDBLite consensus disorder prediction 187 242 - -
Lal4g0422 242 Pfam Response regulator receiver domain 23 172 IPR001789 GO:0000160
Lal4g0422 242 Gene3D - 22 189 - -
Lal4g0422 242 SUPERFAMILY CheY-like 20 172 IPR011006 -
Lal4g0422 242 ProSiteProfiles Response regulatory domain profile. 22 178 IPR001789 GO:0000160
Lal4g0422 242 SMART REC_2 21 174 IPR001789 GO:0000160
Lal4g0422 242 MobiDBLite consensus disorder prediction 187 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0422 Lal-Chr4 2933825 2935779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0422 20 180 Response Regulator Gene Family AT3G57040 55.901 4.18e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal4g0422 Response_reg 7.3e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0422 K14492 - gmx:100801334 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0477 17 3276029 3280166 Lal4g0422 4 2933825 2935779 LSH