Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0407 ATGGAGGAGCAAAATGGTAGTGGCAAATTTAGCACGGGGTTTAGTAAATTGAAACCTTACCTTGCTATGGTGTCACTTCAATTTGGGTATTCTGGAATGTATATCATCACCATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTTTCTGTGTATCGTCATGTAATTGCTGCTGTTTTGATTATCCCTTTTGCTCTTGTTCTTGAAAGAAAGATAAGGCCAAAGATGACTCTCCCAATCTTCCTAAGGATAGTGGTTCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAACTTGTACAACATGGGAATGAAGATGACCTCAACAACGTTTGCATCCGCCACTATAAATGTATTGCCAGCCATTACATTTGTCATGGCACTCATTTTCAGGTTAGAAACAGTGAACATGAAAAAATTCCACAGCGTGGCCAAGTTAATTGGAACGGCAGTAACAGTCTCAGGAGCCATGGTTATGACTTTGTACAAGGGCCCTGCCTTTAGGATCATAAAGGGTGGAGGAGCAATCAGCCACCATGCCTCCGTCACCGCCACCGAGCCCTCTGGCCAGCACCAAGTTCTTGGTACACTAGAGCTCATTGCAAGTTTATGTGGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAATACCCAGCAGAGCTTTCACTTACAGCTTGGATTTGTGTAATGGGTATAATTGAGGGTTCAATTGCTTCATTCATATTTGAAAGAGACTTAAGTGTTTGGGTTATAGGGTGGGACTCAAGGCTCCTTGCTTGTGTTTATTCTGTGAGGTGTGGTGTGTTCTGGAATGGCATACTATGTACAAGGGAACGTGGACCAGTATTTGTAACATCTTTCAGCCCTCTATGTATGATTATTACAGCTGCATTGGGTTCTCTTGTCTTAGCTGAGATGATTCATCTAGGGAGTATATTTGGAGCTATTCTCATTGTCTTGGGGCTTTACACTGTGGTATGGGGCAAAAGCAAAGACAATCATATAGATATAGGGAAAGAAGGGCAAGAATTACCAATAAAGGATGGTATAAAATCAGGGTCAGAAATTTTGGACATTATTGAGATCAATGGTCATGGTGATCACATGTTAAAGAAAGGAGCTAGGAAGAATGACCCATCAGCACCAAGATCATGA 1164 0.4184 MEEQNGSGKFSTGFSKLKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVIAAVLIIPFALVLERKIRPKMTLPIFLRIVVLGFLEPVLDQNLYNMGMKMTSTTFASATINVLPAITFVMALIFRLETVNMKKFHSVAKLIGTAVTVSGAMVMTLYKGPAFRIIKGGGAISHHASVTATEPSGQHQVLGTLELIASLCGWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASFIFERDLSVWVIGWDSRLLACVYSVRCGVFWNGILCTRERGPVFVTSFSPLCMIITAALGSLVLAEMIHLGSIFGAILIVLGLYTVVWGKSKDNHIDIGKEGQELPIKDGIKSGSEILDIIEINGHGDHMLKKGARKNDPSAPRS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0407 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 334 - -
Lal4g0407 387 Pfam EamA-like transporter family 31 147 IPR000620 GO:0016020|GO:0016021
Lal4g0407 387 PANTHER WAT1-RELATED PROTEIN 13 342 - -
Lal4g0407 387 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016021|GO:0022857
Lal4g0407 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0407 Lal-Chr4 2828254 2833777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0407 15 351 Nodulin-like Gene Family AT4G08300 64.140 1.28e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0407 - - gmx:100811114 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0407 4 2828254 2833777 Lal4g0407 4 2828254 2833777 ECH