Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0359 ATGGAAAATTCTTTGAATGAAGCTCATAGAGATCGTAGAATAGATGGTCTTGGAAATCTTCGAGTCCTTCCCGATGAAATCCTTTGCGCAATTTTGGAGCTACTTACTCCTCGAGATGCTGCTCGCGTCGCTTGCGTCAGCAGTGTGATGTACATTTTGTGCAATGAAGAACCACTGTGGATGAGTTTGTGTCTTAAAGGAGTGTCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATAATGAGAATCTGCCAGACAAATATAAAGAGCATGATCGACGACCTTTACATTTTGATGGGTTCAACTCTTTATTTCTGTACAGGAGATTATACCGGTGTCATACCACATTGGATGCGTTTTACGCAGATAATGGAAATGTGGAAAGAATAAAAGACATCTCTTTGAAGGACTTCTATGACGTGTATGATGCAAAGAAACCGGTTATGCTTACTGGATTGGCTGATACATGGCCTGCCAGGCATAAATGGACAACTGAACAGCTGTTGCTAAATTATGGAGATGTTGCATTTAAAATTTCTCAAAGGAGTGCTCGTAAAGTCTCCATGAAGCTCGAAGATTATGTCTCATACACTAAAGTTCAGAATGATGAAGATCCCTTATATATTTTTGATGAAAAGTTTGGCGAAGTTGCACCTAGCTTATTGAAGGATTATTCTGTGCCTCATCTTTTTCAAGAAGACTACTTTGATATATTAGATATAGATAAACGACCATCTTATAGGTGGCTCATAATTGGACCACAGAGATCTGGTGCGTCTTGGCATGTTGATCCTGCTCTTACCAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGATGGGCATTATATCCTCCGGGGAAGGTGCCTCTGGGTGTAACGGTGCATGTTAATGAAGAAGATGGCGATGTCAATATTGATACTCCATCATCACTGCAGTGGTGGCTAGACTTTTATCCTCTTCTTTCTGACGAAGACAAGCCAATTGAATGCACTCAACTACCTGGAGAGACAATTTATGTACCAAGTGGATGGTGGCACTGTGTTTTGAATTTGGACACAACCATTGCTGTCACACAGAATTTTGTGAATTCCAATAACTTCGAATTTGTATGTTTGGATATGGCTCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGACTGCTTGCTCTTGATGAAAATAGTTATGAAAATGTCAAACAGAACTTGTCATATAATGGAGAAAACTTAAGTTACACTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTCATAAAGATGTACAGGATGTAATTAACGAAATAACCATGCATGATGCAACTAGAAGCTATAATTTATGGAAAGATGGGTTTTCCTATGATATAAATTTGTTATCCTTGTTTTTGGATAAAGATAGAGACCACTACAGTTCCCTATGGAGCTCAGGCAACAGCATTGGTCAACGAGAACTAAGAGAATGGTTATCCAAACTTTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGTATTTCACTAAATGCTGACAAGTGGTTAGAATGCCTATTGAAAATTTGTGCTTTCCACAATTTGCCCCCTCCCACTGACGATGAAAGGCTTCCTGTTGGTTCGGGTAGCAATCCTGTTTATCTAGTGGGAGACTCTGTTGTAAAGATTTTTGCTGAAGAAGGACTGGAAGCTTCACTCTATGGCTTTGGCGCAGAGCTAGAGTTCTACAGTCTACTGCATGAAGTCAATTCTCCAATCAGGAAACACATTCCTAATGTTTTGACGAGTGGAATTGTTTATCTTGAAGATGGGTCTTATGCCAATATAACATGGGATGGAAAAGGGGTCCCTGGTGTCATTGCGAAGAGCAATATTATCATGAATAAATGTGACGTTGATGGTTTCTCATTCGGGATTTGGAGAAAGAAGCTTTTGGAGTATAGGAATGCTGGAAAGCCAGTGGAAGGATCAGTTAGTTCAGCTACTCACTCAAGCATATGGCCTTATATGATAACAAAACGATGTGAAGGGAAAATGTTTGCAGAGTTAAGAGACAGACTATCATGGGAAGATGCAAAAAATTTGGCCTCTTTCTTGGGGGAGCAGTTGGGCTACCTTCATCTTTTGCCACATCCACCATTGAACATTTTATCTTTCTCTGATATTGAAGATGAATTAATTTTGCCTGATACTAATGGTTCTAGTGCAACTGTTATTTATAAATCAAACACTGCGGCAGAATGGGGGGTCTTCACCAGAACCTTAGCAAGGAAGAGGAAGGATGTATCAAGCCGTTTGACCAAGGGAGATCCAATCCCTAGCAAACTGATAGAGAAAATTGATGAATATATCCCACCTGATTTCAGCAAACTACTAAATATAGACGAGAATTTCTCGAGTGCTTCTAAACCTTGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGGAACCCTCATTGGTTTCTACCTCAAGTGAGAATACAGAACATGTCACTGTTGTAGAGAATGGTTTTCCAGGTGGCATTGATGAAGTAAAATCCTGGCATCCTAGCTACATCCTTGATTTCAGTAATCTTTCGATAGGTGATCCTATTTATGACTTGATACCAATTTACTTAGATGTGTTTAGAGGTGATTCAGATCTCCTTCAGCGATTTTTAGAGAGTTACAAACTTCCTTTTGCAAATAACATATCAAAGCATGATGAGTCAGCAGAAGGTGGCCAAAAGTTTGCTCGTCTTTCATATGTTGCCATGTGCTATTGTATTTTGCATGATGACAATGTATTGGGAGCAATTTTTAGTATATGGGAAGAATTGAGATCAGCAAAGTCATGGGAAGAAGTTGAGCTGAGAGTGTGGGGAGAGTTGAACAATTACAAAGGTTTTCCTTAA 2919 0.396 MENSLNEAHRDRRIDGLGNLRVLPDEILCAILELLTPRDAARVACVSSVMYILCNEEPLWMSLCLKGVSGLLQYKGSWKKTALHNENLPDKYKEHDRRPLHFDGFNSLFLYRRLYRCHTTLDAFYADNGNVERIKDISLKDFYDVYDAKKPVMLTGLADTWPARHKWTTEQLLLNYGDVAFKISQRSARKVSMKLEDYVSYTKVQNDEDPLYIFDEKFGEVAPSLLKDYSVPHLFQEDYFDILDIDKRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIDTPSSLQWWLDFYPLLSDEDKPIECTQLPGETIYVPSGWWHCVLNLDTTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRAGLLALDENSYENVKQNLSYNGENLSYTDLSRKEKRAKTHKDVQDVINEITMHDATRSYNLWKDGFSYDINLLSLFLDKDRDHYSSLWSSGNSIGQRELREWLSKLWIQKPKMRELIWKGACISLNADKWLECLLKICAFHNLPPPTDDERLPVGSGSNPVYLVGDSVVKIFAEEGLEASLYGFGAELEFYSLLHEVNSPIRKHIPNVLTSGIVYLEDGSYANITWDGKGVPGVIAKSNIIMNKCDVDGFSFGIWRKKLLEYRNAGKPVEGSVSSATHSSIWPYMITKRCEGKMFAELRDRLSWEDAKNLASFLGEQLGYLHLLPHPPLNILSFSDIEDELILPDTNGSSATVIYKSNTAAEWGVFTRTLARKRKDVSSRLTKGDPIPSKLIEKIDEYIPPDFSKLLNIDENFSSASKPCSWIHSDIMDDNIYMEPSLVSTSSENTEHVTVVENGFPGGIDEVKSWHPSYILDFSNLSIGDPIYDLIPIYLDVFRGDSDLLQRFLESYKLPFANNISKHDESAEGGQKFARLSYVAMCYCILHDDNVLGAIFSIWEELRSAKSWEEVELRVWGELNNYKGFP 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0359 972 SUPERFAMILY Clavaminate synthase-like 127 375 - -
Lal4g0359 972 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 8 904 - -
Lal4g0359 972 SUPERFAMILY F-box domain 11 71 IPR036047 GO:0005515
Lal4g0359 972 SMART cupin_9 211 378 IPR003347 -
Lal4g0359 972 Gene3D Cupin 114 368 - -
Lal4g0359 972 ProSiteProfiles JmjC domain profile. 220 383 IPR003347 -
Lal4g0359 972 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Lal4g0359 972 Pfam Cupin-like domain 146 370 IPR041667 -
Lal4g0359 972 SUPERFAMILY Protein kinase-like (PK-like) 672 901 IPR011009 -
Lal4g0359 972 Gene3D - 10 94 - -
Lal4g0359 972 Pfam F-box-like 22 66 IPR001810 GO:0005515
Lal4g0359 972 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 8 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0359 Lal-Chr4 2431836 2439842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0359 8 968 Glycosyltransferase AT1G78280 60.062 0.0 1192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal4g0359 Cupin_8 1.4e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0359 - - gmx:100792541 1643.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0359 4 2431836 2439842 Lal4g0359 4 2431836 2439842 ECH