Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0340 ATGGCACCTAGTTTTGACTGTGTTTCAAGCCTTCTCTGTGCAGAAGATAGCAACAGCGTTTTCGATGACAACTCTTCTGTGTACGAGGACACGTGGAATCATCGTAGGAACCATCAAAGGAATCATTTTGGTGAATCGGATGAGTTACCATTGCAGGATGATGAGTGTTTTGCGATGATGCTTGAAAAGGAACATGAACACTGGCCTGGTGTTGTTTACTTGCATAGGTTACACGGTGGAGATTTGGATTTTGGGTCAAGAAATGAAGCTGTTGATTGGATTGAAAAGATCCGGGTACAATTTGGTTTTGGACCTCTCTGTGCATATCTATCAATAAATTACTTGGATCGCTTCCTTTCTGCATATCGATTGCCGAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGACATGTTTATCTCTGGCAGCTAAAATGGATGAATCTGATGTTCCAATGAGTGTTGATTTGCAGGTGGGTGAATCCAAGTTTGTATTTGAAGCTAAAGCCATTCAAAGAATGGAGCTTCTTGTACTGAGCAAGTTGAGATGGAGAATGCAAGCAATTACTCCGTTTTCATTCATTGATCGTTTCCTTTGCAAGATCAATGATGATCAAAGTCAATTAAGATCTTCGATTTTGCAGTCCGTCCAACTTATATTGAGCACTGCAAGAGGGATTGATTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCTGTGGCTATATCTATTGTGGGGAAAACCAAAACTCTTGACACTAAAAAAACAATTTCTGTTCTGATTCAGCTGGTAGAAGAGGAGAGAATCTTGAAGTGTGTTAAAATGGTCCAAGAGCTATCACTGAACACTAGCATTGCCAAAGATTCAAGTGCTTCTGTACCTTGTGTGCCTCAAAGTCCAATAGGGGTGTTGGATGCTTTGAGTTTCAGCTACAAAAGTGATGATACAAATGCTGGTTCATGTGCAAATTCTTCACACAATAGCCCTGATGCTAAAAAGAGGAAGCTAAACAAAACCTGTGGATCAGAGCTATTGTAG 1041 0.4073 MAPSFDCVSSLLCAEDSNSVFDDNSSVYEDTWNHRRNHQRNHFGESDELPLQDDECFAMMLEKEHEHWPGVVYLHRLHGGDLDFGSRNEAVDWIEKIRVQFGFGPLCAYLSINYLDRFLSAYRLPKGRAWTMQLLAVTCLSLAAKMDESDVPMSVDLQVGESKFVFEAKAIQRMELLVLSKLRWRMQAITPFSFIDRFLCKINDDQSQLRSSILQSVQLILSTARGIDFLEFKPSEIAAAVAISIVGKTKTLDTKKTISVLIQLVEEERILKCVKMVQELSLNTSIAKDSSASVPCVPQSPIGVLDALSFSYKSDDTNAGSCANSSHNSPDAKKRKLNKTCGSELL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0340 346 SMART cyclin_7 193 279 IPR013763 -
Lal4g0340 346 SMART cyclin_7 92 180 IPR013763 -
Lal4g0340 346 Gene3D - 59 275 - -
Lal4g0340 346 CDD CYCLIN 86 179 IPR013763 -
Lal4g0340 346 MobiDBLite consensus disorder prediction 321 346 - -
Lal4g0340 346 SUPERFAMILY Cyclin-like 172 297 IPR036915 -
Lal4g0340 346 Pfam Cyclin, N-terminal domain 56 186 IPR006671 -
Lal4g0340 346 MobiDBLite consensus disorder prediction 329 346 - -
Lal4g0340 346 Pfam Cyclin, C-terminal domain 189 285 IPR004367 -
Lal4g0340 346 PANTHER CYCLINS 1 338 IPR039361 -
Lal4g0340 346 SMART Cyclin_C_2 189 299 IPR004367 -
Lal4g0340 346 Gene3D - 70 187 - -
Lal4g0340 346 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 338 - -
Lal4g0340 346 SUPERFAMILY Cyclin-like 50 186 IPR036915 -
Lal4g0340 346 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0340 Lal-Chr4 2270694 2273644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0340 32 323 Core Cell Cycle Gene Families AT2G22490 45.277 3.63e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0340 K18810 - gmx:547739 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0340 4 2270694 2273644 Lal4g0340 4 2270694 2273644 ECH
Lal17g0383 17 2561451 2564188 Lal4g0340 4 2270694 2273644 LSH