Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0332 ATGCAGGTTGGAAACAAAGGCGAAGCAGAACGCTTACTCGGTATAGCAGAGAAGCTATTACAGAACCGCGATCTGAGCGGTTCAAAGGACTTCGCAATTCTCGCACAAGAAACTGAACCGCTTCTAGAAGGTTCCGATCAGATCCTCGCAATCGCCGATGTTCTCATCGCGGCGGAGAAATCACTGAACAATAACCTTGACTGGTACTCAATTCTTCAAGTTGATCGAAGGTGCCAAGACCATGATCTTATCAAGAGGAATTATCGCAGGTTGGCTCTTCTTCTGAATCCTGACAAAAACCATTTCACTTTGTCTGGTCATGCTTTTAAACTTGTTTCTGATGCATGGACCGTTTTATCGGACCCGGTTCAGAAACCACTGTATGATCAGAACATAGCTGTTCCGGTTCACCAGCAAGATAAGTTACCGTTTCGTAGAGGTAACAGTAACAGTAACAGTTATGGTATTGGTAGTAGTAGCAGTAGTAGTAATTTTTGGACGGCTTGTCCGTACTGTTACTACATGTATGAGTATCATAGGGGTTATGAGGGTTGTTGTTTGAAGTGTCAACATTGTGAGAAATCGTTTCACGGCGTTGCAATTCCGTCCCTGCCCCCGCTTGTGCCGGGGCAGGAGGCGTATTATTGTACTTGGGGCTTCTTTCCTTTGGGTTTTGTGTTTGGGACTTCGGGTTCAGAAACTAGCGGACCTTTACAGTTCCCAAACACAAACCCAAACCCGAACCAGAACCAGACTGAGGTTCCTAGTTGGAACCTGCAGCCACAGTCGCAGCTGCAGCCACAACTATGGTCTCAGCCACAGTCACAGGTGCAGCCACAGGTGCATTTTGCCCCGGTTGATCTCGTGGATGAGGCGAGGGTGGGTGGTGGTGGTGTTTCGAATGGTGCTGGTTTGAGAATGAAATCGAATGGGACGAAGCGAGGAAGGCCGAGGAAGGTGGTTTGA 966 0.4793 MQVGNKGEAERLLGIAEKLLQNRDLSGSKDFAILAQETEPLLEGSDQILAIADVLIAAEKSLNNNLDWYSILQVDRRCQDHDLIKRNYRRLALLLNPDKNHFTLSGHAFKLVSDAWTVLSDPVQKPLYDQNIAVPVHQQDKLPFRRGNSNSNSYGIGSSSSSSNFWTACPYCYYMYEYHRGYEGCCLKCQHCEKSFHGVAIPSLPPLVPGQEAYYCTWGFFPLGFVFGTSGSETSGPLQFPNTNPNPNQNQTEVPSWNLQPQSQLQPQLWSQPQSQVQPQVHFAPVDLVDEARVGGGGVSNGAGLRMKSNGTKRGRPRKVV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0332 321 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 276 - -
Lal4g0332 321 Gene3D DnaJ domain 55 151 IPR036869 -
Lal4g0332 321 MobiDBLite consensus disorder prediction 236 255 - -
Lal4g0332 321 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal4g0332 321 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lal4g0332 321 PRINTS DnaJ domain signature 104 124 IPR001623 -
Lal4g0332 321 SMART dnaj_3 66 124 IPR001623 -
Lal4g0332 321 MobiDBLite consensus disorder prediction 294 321 - -
Lal4g0332 321 CDD DnaJ 67 121 IPR001623 -
Lal4g0332 321 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lal4g0332 321 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 276 - -
Lal4g0332 321 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Lal4g0332 321 Pfam DnaJ domain 67 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0332 Lal-Chr4 2212124 2213089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0332 5 245 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 51.190 9.19e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0332 - - lang:109344257 453.751