Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0326 ATGTCTTCGAATTCCGATTTCCTACGCGCAATTGAGTCTGTTCTTGGCGTTTCTCTCGGTGATTCGGTTGTTCTGATAGCAACTACTTCTGTAGCGGTTATAATCGGACTTCTGGTGCTGTTATGGAAGAAATCGTCCGATCGGAGCAAGGAGTTGAAGCCGCTGGTAGTGCCGAAGACGTTGGTTAAGGATGAAGATGATGATGTTGATCTTAGCGATGGGAAGACTAAGCTCACCGTTTTCTTTGGTACTCAAACTGGTACTGCTGAGGGATTTGCTAAGGCTTTAGCAGAGGAGATAAAGGCAAGGTATGAAAAAGCAGCTGTCAAAGTTGTTGACCTGGATGATTATGCAATGGATGATGATCAATATGAGGAGAAGCTGAAGAAAGAGACTATTGCTTTTTTCATGGTGGCAACTTATGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTACAAGTGGTTTAGCGAGGGGAAAGATGGGAGAGGCACCTGGCTTCAACAGCTGAAATATGGAGTTTTTGGCCTAGGTAACAGGCAATATGAACATTTTAATAAGATAGGTGTGGTCATAGATGACGACCTTAGTGAACAAGGTGCGAAGCGCCTTGTTCCACTTGGGCTAGGTGACGATGATCAGTCCATTGAGGATGATTTTAATGCATGGAAAGAAACTCTGTGGCCTGAGTTGGATCAATTGCTCCGAGATGAGGGTGATGCTGATACTGGTTCTACTCCCTATACAGCTGTTATTCCTGAATATCGAGTAGTGATTTATGACCCTTCTGTTACATCATCCTATGATAATCACTTAAATATGGCAAATGGGAATGCTGTGTTTGATATTCACCATCCTTGCAGGGTTAATGTTGCTGTCCAAAGGGAGCTTCACAAACCTGAGTCTGACCGCTCTTGCATACATTTGGAGTTTGATACATCTGGGACTGGCATAACATATGAAACTGGAGACCACGTGGGGGTTTATGCTGAGAACTGTGATGAAACTGTTGAAGAAGCTGGGAAGTTGCTGGGTCAGGAATTAGATTTGCTGTTTTCTCTTCACATAGATAATGAAGATGGCACTTCCCTGGGAGGTTCTTTGCAGCTTCCTTTTCCTGGTCCTTGCACACTGCGTGCTGCATTAGCACGTTATGCAGATCTCTTGAATCCCCCACGAAAGGCTGCTTTAGTTGCATTAGCTGCTCATGCATCTGAACCCAGTGAAGCAGATAGATTAAAGTTCCTCTCTTCTCCGCAAGGGAAGGATGAGTACTCCAAGTGGGTGACTGGAAGCCAGAGAAGTCTCCTTGAGGTCATGGCTGAGTTTCCTTCGGCAAAACCTCCTCTTGGTGTTTTTTTTGCTGCAGTAGCCCCTCACTTACAGCCACGCTATTATTCTATTTCATCCTCTCCAAGGTTTTCCCCTCAAAGGGTACATGTAACTTGTGCCTTGGTGTGTGGTCCAACTCCCACTGGTAGAATACACAAAGGTGTATGTTCAACCTGGATGAAGAATGCTATTCCCTTGGAGAAAAGTCGGGACTGTAGCCAGGCTCCTATTTTTATTAGGCCATCAAACTTCAAGCTACCAGCTGATCATTCAATTCCTATTATTATGATTGGTCCTGGTACTGGCTTGGCTCCTTTCAGGGGATTTTTACAGGAAAGATTTTCCCTCAAAGAGAATGGTGTTCAACTTGGTTCTGCAGTACTTTTCTTTGGATGTAGAAATCGTCAAATGGATTTTATCTACGAGGATGAGCTTAAGAATTTTGTGGAACAAGGTTCTCTGTCTGAGTTGATAGTTGCATTCTCTAGAGAGGGGCCTGAAAAGGAGTATGCTCAACACAAGATGATGGATAAAGCAGCATATCTATGGAGTTTGATTTCTCAAGGAGCTTATCTTTATGTCTGTGGTGATGCCAAGGGCATGGCCAGAGATGTTCATCGTACTCTTCATACAGTAGTCCAGCAGCAGGAAAATGTGGACTCATCAAAGGCAGAGGGTATAGTAAAAAAGCTCCAGATGGATGGACGTTACCTTAGAGATGTCTGGTATGATGCAACGACGGTGTTAACGTTGCTTCAGGAAATAGCGCAATACCCTGGTTCGAAGATTGATTGGAATGAATTGGTGAGGAACACAACCACTGGAATATCTAACGCCAGAGAATATCAAATGCTGTGGCGCCACTTGGCCTACCGTGATGCTTTGCCTGAAAACCCCGGCGACGCCGAGGAACCTTTGGATGATAATAGTGATGTAGAATATGAGCTGGAAGCATTACCACCCATTAGTGCTGACTCTGCATCGGAGGCTACAGCGTGTGTGAAGGTGGATATACTTTCTCTGATTAACCTATCTCAACATGCTAGGCCTTTGGGGTTCACGCCTTTGCTAGTTACATCTTACTTATTTGATTATCATATGGTAATGATTGCTTCATGCATGCCAAGTATCCCTAGTAGCTCTACGATCGAGGCTCCGTTGACTGTAAATATTCCAGTTTGCCATTCATCTAGAACTCCTAATGAAAGTTCAGATCCCTCCAATTTGCTGCAAGGGCCGAGCATTATTTTTCCAGTTACTGTTCAGAGAACACCATTGCCTACTGTATCATCAACAGAAGGTCTAGAAACCAAGGGCACAGTTGGTGGCAACATGGCTTCGAAAAGAAAACGATGGTCAGAGGAAGAAGACAATCAACTACGAGCTGCTGTTCAAAGATGGGGTGAAGGGAATTGGACAACTATGGCTAAAGGAGAGAATTTTACGGTGAAGAGAACTGGTGTACAATTGTCTCAGCGGTGGAAATTTTTGAGGACAAAACAGGACAGTACCATTCTGGGTACGAACTCAGTACCAAGTCGGTGTACGCCTGCTGTACAGAAGGCAACAAATGATGCATTACAACAGGCAACAAATAATGCATTATCTTGTGCCCTTGGTGGGAAGTTTGCTGCTCCTGGAGCGACCAATCCTGGTAGTTTCCTTTCCATTTTATTGTCTGGTATATCTTTTAACAAATCAGTTAACAGCTCCGTGCAGCCTTGTAATATCGTTGAAGCTCCAATAGTTTGCAAGAACTTGGTACCAACTCAGAATCTATCTCAGAAAGCCGTGATAGGATCTTGTGATCACCATGCAAAGTCTAAGTCAATCCTTGAAAAAACAGTGGTGAAGTGCAATCCAACTCTAGATTCTATAGTAAAAACTAACACAATTGCTTCTGGTGCACGGAATGTTTCTTCGTCAAATACTGTGTCACAGTTTAAGGTTGCTCAAACAAGTAGTTCTTTGGTAAAGCCAACTATTCCTGTTGCTTTGTGTTCCAATCCAAAGTTACCTAATGTTCGCACTGATTCAAGTGTTGCACCTGCACTTGTTCCCTCCAAATCAGTTGCTGTTGTCACATCTCATGCTTCATGTGTTAGTACTATAAAGCCTGTCTCATCCATGTTGAAGAGTTCACATGTAGCTTTGTCTAAATTGTCTGAACCGGACAAACATGTTACTTATGTGGTTAATAAAGTAGTTCCGGTGAAGCAAGAAGTGATCGCGACAGATGAATTTAAAGTTCCTGTTCCATCTCCTACATCAAAAGACAAGGTCCAAGCATATGAGACTTCTACAGTTACTACCAACAAAAATCGTATGCCGGTTCAAAGCATCTTCAACAAGGGGAGAGAAGATTTGAATCAAGATAAGGGCATAAATTTGCCTTTTAATAAAGGAGGCGAAACTTCTACTACAAAAAATACAAGTGTGGAAATTTCAAATGATAATGCAGTCTCACAAAATTCAGGAGAGTGTCAAGACCAAGGAACTGTTAAGGTTACTGAGAATCGTCAAGTTGCTACTGATAGCAAGATAGACGGGAGTCAAAGTTTAGATCAAGAGAAGAACATAAATTTGTATGAACAGTGA 3933 0.4297 MSSNSDFLRAIESVLGVSLGDSVVLIATTSVAVIIGLLVLLWKKSSDRSKELKPLVVPKTLVKDEDDDVDLSDGKTKLTVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDDQYEEKLKKETIAFFMVATYGDGEPTDNAARFYKWFSEGKDGRGTWLQQLKYGVFGLGNRQYEHFNKIGVVIDDDLSEQGAKRLVPLGLGDDDQSIEDDFNAWKETLWPELDQLLRDEGDADTGSTPYTAVIPEYRVVIYDPSVTSSYDNHLNMANGNAVFDIHHPCRVNVAVQRELHKPESDRSCIHLEFDTSGTGITYETGDHVGVYAENCDETVEEAGKLLGQELDLLFSLHIDNEDGTSLGGSLQLPFPGPCTLRAALARYADLLNPPRKAALVALAAHASEPSEADRLKFLSSPQGKDEYSKWVTGSQRSLLEVMAEFPSAKPPLGVFFAAVAPHLQPRYYSISSSPRFSPQRVHVTCALVCGPTPTGRIHKGVCSTWMKNAIPLEKSRDCSQAPIFIRPSNFKLPADHSIPIIMIGPGTGLAPFRGFLQERFSLKENGVQLGSAVLFFGCRNRQMDFIYEDELKNFVEQGSLSELIVAFSREGPEKEYAQHKMMDKAAYLWSLISQGAYLYVCGDAKGMARDVHRTLHTVVQQQENVDSSKAEGIVKKLQMDGRYLRDVWYDATTVLTLLQEIAQYPGSKIDWNELVRNTTTGISNAREYQMLWRHLAYRDALPENPGDAEEPLDDNSDVEYELEALPPISADSASEATACVKVDILSLINLSQHARPLGFTPLLVTSYLFDYHMVMIASCMPSIPSSSTIEAPLTVNIPVCHSSRTPNESSDPSNLLQGPSIIFPVTVQRTPLPTVSSTEGLETKGTVGGNMASKRKRWSEEEDNQLRAAVQRWGEGNWTTMAKGENFTVKRTGVQLSQRWKFLRTKQDSTILGTNSVPSRCTPAVQKATNDALQQATNNALSCALGGKFAAPGATNPGSFLSILLSGISFNKSVNSSVQPCNIVEAPIVCKNLVPTQNLSQKAVIGSCDHHAKSKSILEKTVVKCNPTLDSIVKTNTIASGARNVSSSNTVSQFKVAQTSSSLVKPTIPVALCSNPKLPNVRTDSSVAPALVPSKSVAVVTSHASCVSTIKPVSSMLKSSHVALSKLSEPDKHVTYVVNKVVPVKQEVIATDEFKVPVPSPTSKDKVQAYETSTVTTNKNRMPVQSIFNKGREDLNQDKGINLPFNKGGETSTTKNTSVEISNDNAVSQNSGECQDQGTVKVTENRQVATDSKIDGSQSLDQEKNINLYEQ 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0326 1310 PRINTS Flavodoxin signature 79 92 IPR001094 GO:0010181
Lal4g0326 1310 PRINTS Flavodoxin signature 135 146 IPR001094 GO:0010181
Lal4g0326 1310 PRINTS Flavodoxin signature 170 180 IPR001094 GO:0010181
Lal4g0326 1310 PRINTS Flavodoxin signature 194 213 IPR001094 GO:0010181
Lal4g0326 1310 SMART sant 893 945 IPR001005 -
Lal4g0326 1310 CDD CYPOR 283 687 - -
Lal4g0326 1310 CDD SANT_TRF 895 940 - -
Lal4g0326 1310 Gene3D - 531 688 IPR039261 -
Lal4g0326 1310 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 10 687 - -
Lal4g0326 1310 Gene3D - 889 944 - -
Lal4g0326 1310 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 285 532 IPR017927 GO:0016491
Lal4g0326 1310 Pfam FAD binding domain 282 504 IPR003097 GO:0016491
Lal4g0326 1310 Pfam Myb-like DNA-binding domain 894 940 IPR001005 -
Lal4g0326 1310 Gene3D - 44 243 IPR029039 -
Lal4g0326 1310 Gene3D - 331 463 IPR023173 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 321 331 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 465 472 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 499 508 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 540 559 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 569 578 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 582 593 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 613 629 IPR001709 GO:0016491
Lal4g0326 1310 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 636 644 IPR001709 GO:0016491
Lal4g0326 1310 SUPERFAMILY Homeodomain-like 892 943 IPR009057 -
Lal4g0326 1310 Hamap NADPH--cytochrome P450 reductase [POR]. 18 688 IPR023208 GO:0003958
Lal4g0326 1310 Gene3D Translation factors 287 530 - -
Lal4g0326 1310 ProSiteProfiles Flavodoxin-like domain profile. 78 229 IPR008254 GO:0010181
Lal4g0326 1310 SUPERFAMILY Flavoproteins 74 236 IPR029039 -
Lal4g0326 1310 Pfam Flavodoxin 80 224 IPR008254 GO:0010181
Lal4g0326 1310 MobiDBLite consensus disorder prediction 874 902 - -
Lal4g0326 1310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 889 947 IPR017930 -
Lal4g0326 1310 Pfam Oxidoreductase NAD-binding domain 541 651 IPR001433 GO:0016491
Lal4g0326 1310 PANTHER NITRIC OXIDE SYNTHASE-RELATED 10 687 - -
Lal4g0326 1310 SUPERFAMILY Riboflavin synthase domain-like 254 529 IPR017938 -
Lal4g0326 1310 ProSiteProfiles Myb-like domain profile. 889 943 IPR001005 -
Lal4g0326 1310 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 528 687 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0326 Lal-Chr4 2162550 2179912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0326 894 940 MYB-Related Transcription Factor Family AT3G18100 48.936 8.47e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal4g0326 FAD_binding_1 4e-78 CL0076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0326 K00327 - gmx:100781568 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0326 4 2162550 2179912 Lal4g0326 4 2162550 2179912 ECH