Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0323 ATGCCTCACAGAACCACTTACATTTTCCCGCGTCAATTCCCTGATCGACGGTTACATGATGAATCTTCCAAAGATCACGAGAACCAAAAACTTTTCAACTCAACCAAATCAGGTTGTACTTTTCGTGTTGAAACCGACTTTTCAAAAAATGCGCCATTTCTAACGGAAAACGGCGATGACGTCGTTTTATCTTCCGGTAAGAAACACTCCGCCGCATCGAACATTTTCGCCGCCGGAACCGGCGGCAAATTCAGAATTACCAAAAACAAGCAAATCGATGTTTTACGCGATTGGTTGAACGATAAAAAAGAATATCGCTCCGGTTACCGCCGGATTTCCTCTTCCTCCGAGGAGGAGCGCGGCCTTCTGCATACATCAGAGAAGAGAACCGCCGTCGATCGGCAAGTATCGCTGCCGAGGGTTTCGAGCGAGAGTAGCTATGCAGAGAGCTTGTTTTCCGGAACGACGACGTTGGATGGGAATTTATCGAGTGACGTTAAGGATGATACGTCGTCGTGTCGTGTTTCCATCAGTGTGAAGGAGGAGCAGGAAGAGAAGAGAGAGAGGTTGGCGAAGAAGTATGAAGAAAGCTATATACTGCAATTGATGTTTGCCAAAAGACTTACTTGTTTGGCAAGCCTTGTAACAGAGCCAGGTCTGGGTACTGAGACTTGGGATGCAGAATCCGTTTCTTATCGTCTTTGGTTAAGTGGGTGTTTGTCATATTCGGATAAGATATCGGACGGTTTTTATAACATATTGGGGATGAATCCGTATCTGTGGGTAATGTGCAATGAGGTGGAGGAAGGTGGTAGGAATAGAATACCTACATTGATGGCGCTGAAAGATGTTGAACCCAGGGAGACCACTATGGAGGTGGTGCTTGTTGATAGACACGAAGACTCCAGGCTGAAGATGCTTCAAGATAAAGCACAAGAGTTGTATTATGCATCAGAGAACACCTTGGTGTTGGTCCAACAACTTGGAAAACTTGTTGCCATATGTATGGGGGGTACATTCCCAATGGAGCAAGGAGATATGCACAAACGGTGGAAGTTGGTTAGTAAGAGGTTGAGGAATTTCCGCAAGTGTGTTGTGCTTCCCATTGGTAGCCTCTCTATTGGGCTTTGTAGGCATCGAGCGATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGCATAGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTAGTCAAGATTAAATATGACAAGCAGCTCTCAAGGGAATATGTAGTCGACCTAGTTGGGGAACCAGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCATATGTTTCTTCGATGCCGTCCCCCTTTCAAATTTCTCATTTAAAAGAATCACAATCACCTTATTTGGATGGTGCATCGTCTTCTCAATCTAAAAGTTCCAATCACAACTCTGTTATTCAGGAAACTCATCTGTGTTCAGACTGCGGACAGAAAGATCAACAAGTTAAAGAAACAGATTTGCCGAATAATCACAAGGGCCCCATTTATGCTTCAGTTGATCAAACCTATGAAGGAACAGAACCACGACTAAATCTTCTTGGCTTGAAAGGGAATGATGAGGAATGCACAGTTCTGGATTCAATTTTGCCTCCCATCCATGAAGATGTTGTTTCTAAAGCTCTCCATCCAGTGACTGAAGCATCATTAGATGAGTATCCCAGGCTTATTGAAGATTCAGTCGTAGTACAAGAAACGTCCAACAGTGAGATCATTGTAACTGGAAGTTCTGTTGTAAAGAGTACCTTTAAGCAATCTATAATCAATTCCTCCTGCCAGTCAGAACTGACACAGTTAGACAAGAGCATTGAAAACCTGTGCTGTTTACCAGCTGGGAGTATTCCAAGATACGTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGAATTAAAGAGTGTGTTGGTGCTGGCTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCAGACGTTGCAGTCAAGGTTTTGACAGTTCAGGAATTCGAAGATGACCAGATGAAGGAGTTTCTAAGAGAGGTAGCAATAATGAAACGTGTTCGTCATCCAAATGTTGTCCTCTTCATGGGTGCAGTTACAAAACGTCCCCATCTATCTATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATTCCGCCTGATACATAGGCCAGCATCTGGTGAAATTCTGGATCATAGGAGAAGATTGCGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTTCATTGTCTTAAACCTCCGATCGTGCACTGGGATCTAAAATCACCAAACTTGTTAGTGGACAAAAATTGGACTGTTAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCGGATACTTTCATACCGTCAAAATCTGTTGCTGGAACACCCGAGTGGATGGCTCCAGAGTTTCTTCGGGGAGAACCTACAAATGAGAAATCTGACGTCTACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGCAACAACCATGGAGTGGACTTGGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATAGGAGGCTTGCTGTTCCTCAAAACATCTCCCCATCATTGGCCTCCCTCATGGAATCATGTTGGGCTGATGACCCTAGTCAACGCCCATCTTTTGCTAGCATAGTTGACTCACTAAAGAAGCTGCTGAAGTCTCCAGCAGAGAAGATTAAAATGGGTGAGACATAA 2778 0.4428 MPHRTTYIFPRQFPDRRLHDESSKDHENQKLFNSTKSGCTFRVETDFSKNAPFLTENGDDVVLSSGKKHSAASNIFAAGTGGKFRITKNKQIDVLRDWLNDKKEYRSGYRRISSSSEEERGLLHTSEKRTAVDRQVSLPRVSSESSYAESLFSGTTTLDGNLSSDVKDDTSSCRVSISVKEEQEEKRERLAKKYEESYILQLMFAKRLTCLASLVTEPGLGTETWDAESVSYRLWLSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEGGRNRIPTLMALKDVEPRETTMEVVLVDRHEDSRLKMLQDKAQELYYASENTLVLVQQLGKLVAICMGGTFPMEQGDMHKRWKLVSKRLRNFRKCVVLPIGSLSIGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKYDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQISHLKESQSPYLDGASSSQSKSSNHNSVIQETHLCSDCGQKDQQVKETDLPNNHKGPIYASVDQTYEGTEPRLNLLGLKGNDEECTVLDSILPPIHEDVVSKALHPVTEASLDEYPRLIEDSVVVQETSNSEIIVTGSSVVKSTFKQSIINSSCQSELTQLDKSIENLCCLPAGSIPRYVNLEPSLAMDWLEISWDDLRIKECVGAGSFGTVHRAEWHGSDVAVKVLTVQEFEDDQMKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASGEILDHRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKADTFIPSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLAVPQNISPSLASLMESCWADDPSQRPSFASIVDSLKKLLKSPAEKIKMGET 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0323 925 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0323 925 Gene3D Transferase(Phosphotransferase) domain 1 734 922 - -
Lal4g0323 925 Pfam Protein tyrosine and serine/threonine kinase 656 909 IPR001245 GO:0004672|GO:0006468
Lal4g0323 925 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 170 923 - -
Lal4g0323 925 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672|GO:0006468
Lal4g0323 925 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672|GO:0006468
Lal4g0323 925 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672|GO:0006468
Lal4g0323 925 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672|GO:0006468
Lal4g0323 925 SMART serkin_6 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0323 925 SUPERFAMILY Protein kinase-like (PK-like) 633 908 IPR011009 -
Lal4g0323 925 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 170 923 - -
Lal4g0323 925 Coils Coil 180 200 - -
Lal4g0323 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Lal4g0323 925 Pfam Ethylene-responsive protein kinase Le-CTR1 227 437 - -
Lal4g0323 925 CDD STKc_MAP3K-like 661 909 - -
Lal4g0323 925 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Lal4g0323 925 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0323 Lal-Chr4 2143654 2151612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0323 1 923 MAP Kinase Kinase Kinase AT4G24480 54.990 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal4g0323 PK_Tyr_Ser-Thr 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0323 - - gmx:100808435 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0323 4 2143654 2151612 Lal4g0323 4 2143654 2151612 ECH