Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0293 ATGGCGATTGCAACAGAGACACAACAACCTCAATCTCAACATCAACACAAGGCTTCTTCAGAGGTTTCAGATGGGGAACAAAGAAGATGGACCCTCAATGATTTTGATATTGGGAAACCTCTTGGAAGGGGGAAATTCGGCCATGTCTATCTGGCCAGAGAAAAGAGAAGTAACCATATTGTTGCGCTGAAAGTGCTCTTTAAGAGCCAATTACAACAATCACAAGTTGAGCACCAGCTTCGCAGAGAAGTTGAAATTCAAAGTCATCTCCGACATCCCCACATCTTGCGTCTTTATGGATACTTTTATGATCAGGCATACCTCTTTTTATGCTTATATATCATTAGAATCTATCCATGTATTAAACGTGTTTATTTGATTTTGGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTGGCATCATTGGCTCGGGCCCTTATATATTGCCATGGAAAGCATGTAATACACAGGGACATCAAACCAGAGAACCTTTTGATTGGTGCACAGGGTGAGCTAAAGATAGCTGACTTTGGCTGGTCAGTCCACACATTCAATCGCAGGCGGACCATGTGTGGCACGCTGGATTACCTCCCTCCTGAGATGGTGGAGAGTGTAGAACATGATGCCAGTGTGGATATATGGAGCCTTGGTGTCCTGTGCTATGAGTTTCTCTATGGAGTTCCACCTTTTGAGGCTAAAGAGCATTCTGATACCTATAGGAGGATTGTACAAGTTGATCTCAAGTTTCCTCCTAAACCGATCGTGTCGTCCGCAGCCAAGGACCTGATCAGTCAGATGCTGGTCAAGGATTCTACTCAACGGCTACCACTGCACAAGCTTCTTGAACATCCTTGGATTGTTCAGAATGCAGAGCCCTCTGGTGTATATAGGGGCTAG 945 0.4402 MAIATETQQPQSQHQHKASSEVSDGEQRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQAYLFLCLYIIRIYPCIKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSTQRLPLHKLLEHPWIVQNAEPSGVYRG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0293 314 ProSiteProfiles Protein kinase domain profile. 35 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0293 314 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 314 - -
Lal4g0293 314 PIRSF ILK 3 299 - -
Lal4g0293 314 CDD STKc_Aurora 34 303 - -
Lal4g0293 314 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Lal4g0293 314 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 314 IPR030616 GO:0004672
Lal4g0293 314 SUPERFAMILY Protein kinase-like (PK-like) 19 306 IPR011009 -
Lal4g0293 314 MobiDBLite consensus disorder prediction 1 18 - -
Lal4g0293 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Lal4g0293 314 MobiDBLite consensus disorder prediction 1 26 - -
Lal4g0293 314 Gene3D Phosphorylase Kinase; domain 1 23 115 - -
Lal4g0293 314 Pfam Protein kinase domain 37 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0293 314 SMART serkin_6 35 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0293 314 Gene3D Transferase(Phosphotransferase) domain 1 116 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0293 Lal-Chr4 1914465 1917529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0293 26 313 CBL-interacting serine-threonine protein kinases AT5G10930 33.220 1.82e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lal4g0293 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0293 K08850 - gmx:100803678 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0293 4 1914465 1917529 Lal4g0293 4 1914465 1917529 ECH
Lal21g0429 21 2970155 2972947 Lal4g0293 4 1914465 1917529 LSH