Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0289 ATGGCTAAAGCTGCTCCAACATCTTCAAAGTCTCTCTTCATGTTTATATGGCTTTTCATTTTCATGCTCAACTTCAATTCATCACAAGGACAAGAAGAGGTTGAACTTCTCTTATCTTTCAAGGCTTCAATCCATGACCCTCTTCACTTTCTCTCCAACTGGCTCAATTCCTCATCTATTTGCAAGTGGCATGGCATCACTTGCAGCAACTCTTCAAATGTTAACTCCATTATGCTCTCATCAAAAAACTTCTCTGGTGAGATTTCCTCAACCATGTTTCAACTTCCATATGTTACAAACATTGACCTCTCCAACAACAAGCTTGTTGGAGAAATCAAACTCAACCATTATTCTTCTCTTTCTTCACCACTCCGTTACCTTAACCTCAGCAACAACAACCTCACAGGTTTTCTGCCACAAACCTTGTTCTCAGCATCCTTTTCAAACCTTGAAACTTTGGACCTCTCGAACAACATGTTTTCTGGTGTGATACCAAACCAAATTGGATTGCTTCCAAGCCTAAAGTATCTTGATATTGGAGGAAATGTTTTGGTTGGAAAGATTCCAAATTCCATAACCAATTTGACCACTTTACAATACCTCACTTTGGCATCAAACCAATTAGTTGGTGAAATTCCAAAGGACATAGGCCTAATGAAGAGTTTGAAGTGGATTTACTTTGGTTATAACAATCTTTCAGATGAGATACCAAGAAGCATTGGAGAGTTATACTCTTTGAATCACCTTGACCTTGTTTACAACAATCTTACAGGACCATTACCCGAATCTCTTAGAAACCTCACTCACCTTCAGTATCTCTTTGTCTACCAAAACAAACTTTCTGGTCCAATTCCCTTATCCATTTATGAACTCAGAAACCTTGTTTCTCTTGATTTAAGTTATAATTCCCTTTCTGGTGAGATTTCTGAGCTTGTTATTAACCTCCAAAGACTAGAGATTCTTCACCTTTTCTCAAACAGTTTTACTGGAAAAATTCCAAAGTCTTTAACATCTTTGCCTCGGCTTCAAGTTCTTCAACTATGGTCAAACAAGTTAATTGGTGAGATTCCACAAGAGCTAGGAAAGCATAACAACCTCACTGTCTTGGACCTTTCCTCCAACAACCTTATAGGGAATATTCCAGATTCTTTATGTGACTCTGGCATTCTTTACAAGCTCATTCTTTTCTCCAACGCTTTGGAAGGTGAAATCCCAAACAGCTTAAGCTCTTGCACAAGCTTAGGCAGAGTGCGCCTTCAAGACAACAAGCTTTCTGGCTCATTACCAACAGATCTAACCAAACTTCCTCATATATACATGTTGGATATCTCTGGCAACAAACTTTATGGAAGGATTGATGATAGAAAGTGGAATATGAAAGCACTTCAAATGCTGAGTTTGGCTAATAACAACTTCTCAGGGAACCTTCCAAACACTTTTGGGAGTGCCAAACTAGAGGACCTGGACTTATCACACAATCAATTTTCAGGTTATATTCCACATGGTTTTGGAAGCTTATCAGAGGTGATGCAATTGAAGCTAAGCAATAACAACCTCTATGGTAACATCCCAGAAGAAATATGTTTGTGCAAGAAGCTTGTGGTTTTAGAATTCAGCCACAACCACCTTACCGGTCACATACCGGTAAAACTTTCTGAGATGCCAGTTCTTAGTCTTCTTGATTTATCTTCAAACCAACTTTCTGGCGAGATTCCAAAACATCTAGGAAGTGTGAAATCTCTTGTTCAAGTTAATATATCACACAACCATTTTCATGGAAGTTTACCATCCACTGAAGCTTTCCTCGCCATTAATGCAAGTGCAATAACCGGCAACAACCTTTGTGATAGTACTTCAAGTTCAAGCGGGTTGCATTTGCCACCATGCAAAAAAAGCAATGATCAAAATCCGACTTGGCAATTCATTTTACTATGTTTTTTTGTGGGGTTGGTTGTTCTAACCGTAGCTTATTTTCTCATTGTTTTTGTTCATAGAAGACATAATTTGAAAGTGAGAAGAGTGGAAAATGAAGATGGCACGTGGGAAATACAATTCTTCGACTACAAGGTGGCGAAAATGATAACAATTGAAGATGTTTTGTCTGCAGCTAAAGAAGGAAAAGTGATTTCCAAAGGAAGGAATTGGGTTTCATACGAAGGAAAGTCTTCAAAGAATGACATGCAATTCATGGTAATAGAAATGAGTGATCCAACTTCACTTCCTTTGAGTTTTTGGGAAGAGATAATGAAGTTTGGGAAGGTTAAGCACCCAAATGTGGTTAACCTTATTGGAACATTATGTATGTCTTCTGGGAAGAGAGGGTTCTTGGTGTATGATTATTCATCGAAAGAAAAAACCTTAAGTGATATTTTAAGCAGTTTGAGTTGGGAAAGGCGAAGAAAAATTGCTGTAGGGATTGCAAAAGCGTTGAAGTTCTTGCATTGTCACTGTTCTTCGTTCGTTTTGGTTGGTGAAGTGTCACCAGAGATTGTTTTAGTGGAAGATGCTAAGGGTGTCCCTCGTTTGAAGGTCAGCCCTTCAGAAATGGCATGTATGGATTTCAAGGGTGACATTTTTTCACCCTATCTTGCCCCAGAGGCAAAAAAGATGAAAGAAGTGTCAGAGAAGAGTGCAATATATGGGTTAGGAGTTATACTGATTGAATTATTGAGCGGAAGAAGAAGCATGGATACAGAAGCAGGGAATGGCATGCATCAGAACATTGTTGAGTGGGCCCAATACTGCTACTCAGACTGTCATGTTGACACGTGGATAGATCCTGTGATGATAAAGGGTGGAGATGCATCATCATCCAGTAACCAAAACGACATCGTTGAGACTATGAATCTGGCACTGCATTGCACTGCAACAGATCCCAAAGCAAGACCATGCGCAAGTGAAGTACTCACAGCATTAGTGGCTGTTCATACAAACGCTACACCAACTTTTTGTTGA 2955 0.3922 MAKAAPTSSKSLFMFIWLFIFMLNFNSSQGQEEVELLLSFKASIHDPLHFLSNWLNSSSICKWHGITCSNSSNVNSIMLSSKNFSGEISSTMFQLPYVTNIDLSNNKLVGEIKLNHYSSLSSPLRYLNLSNNNLTGFLPQTLFSASFSNLETLDLSNNMFSGVIPNQIGLLPSLKYLDIGGNVLVGKIPNSITNLTTLQYLTLASNQLVGEIPKDIGLMKSLKWIYFGYNNLSDEIPRSIGELYSLNHLDLVYNNLTGPLPESLRNLTHLQYLFVYQNKLSGPIPLSIYELRNLVSLDLSYNSLSGEISELVINLQRLEILHLFSNSFTGKIPKSLTSLPRLQVLQLWSNKLIGEIPQELGKHNNLTVLDLSSNNLIGNIPDSLCDSGILYKLILFSNALEGEIPNSLSSCTSLGRVRLQDNKLSGSLPTDLTKLPHIYMLDISGNKLYGRIDDRKWNMKALQMLSLANNNFSGNLPNTFGSAKLEDLDLSHNQFSGYIPHGFGSLSEVMQLKLSNNNLYGNIPEEICLCKKLVVLEFSHNHLTGHIPVKLSEMPVLSLLDLSSNQLSGEIPKHLGSVKSLVQVNISHNHFHGSLPSTEAFLAINASAITGNNLCDSTSSSSGLHLPPCKKSNDQNPTWQFILLCFFVGLVVLTVAYFLIVFVHRRHNLKVRRVENEDGTWEIQFFDYKVAKMITIEDVLSAAKEGKVISKGRNWVSYEGKSSKNDMQFMVIEMSDPTSLPLSFWEEIMKFGKVKHPNVVNLIGTLCMSSGKRGFLVYDYSSKEKTLSDILSSLSWERRRKIAVGIAKALKFLHCHCSSFVLVGEVSPEIVLVEDAKGVPRLKVSPSEMACMDFKGDIFSPYLAPEAKKMKEVSEKSAIYGLGVILIELLSGRRSMDTEAGNGMHQNIVEWAQYCYSDCHVDTWIDPVMIKGGDASSSSNQNDIVETMNLALHCTATDPKARPCASEVLTALVAVHTNATPTFC 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0289 984 Pfam Leucine Rich Repeat 365 385 IPR001611 GO:0005515
Lal4g0289 984 ProSiteProfiles Protein kinase domain profile. 703 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0289 984 SUPERFAMILY L domain-like 312 603 - -
Lal4g0289 984 SMART LRR_typ_2 120 145 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 195 219 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 147 171 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 243 266 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 483 505 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 365 387 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 459 482 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 339 363 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 554 578 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 291 315 IPR003591 -
Lal4g0289 984 SMART LRR_typ_2 506 530 IPR003591 -
Lal4g0289 984 Pfam Protein kinase domain 743 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0289 984 SUPERFAMILY L domain-like 68 381 - -
Lal4g0289 984 Gene3D Transferase(Phosphotransferase) domain 1 782 982 - -
Lal4g0289 984 PANTHER - 11 975 - -
Lal4g0289 984 Gene3D Phosphorylase Kinase; domain 1 667 780 - -
Lal4g0289 984 Pfam Leucine rich repeat 461 519 IPR001611 GO:0005515
Lal4g0289 984 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Lal4g0289 984 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Lal4g0289 984 Gene3D Ribonuclease Inhibitor 291 630 IPR032675 -
Lal4g0289 984 SMART serkin_6 703 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0289 984 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 975 - -
Lal4g0289 984 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Lal4g0289 984 ProSiteProfiles Leucine-rich repeat profile. 149 171 IPR001611 GO:0005515
Lal4g0289 984 Gene3D Ribonuclease Inhibitor 188 290 IPR032675 -
Lal4g0289 984 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Lal4g0289 984 SUPERFAMILY Protein kinase-like (PK-like) 688 972 IPR011009 -
Lal4g0289 984 PRINTS Leucine-rich repeat signature 124 137 - -
Lal4g0289 984 PRINTS Leucine-rich repeat signature 291 304 - -
Lal4g0289 984 ProSiteProfiles Leucine-rich repeat profile. 365 387 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0289 Lal-Chr4 1879629 1884235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0289 13 972 Receptor kinase-like Gene Family AT2G25790 51.340 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lal4g0289 Pkinase 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0289 - - gmx:100777118 1376.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0289 4 1879629 1884235 Lal4g0289 4 1879629 1884235 ECH