Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal4g0274 | ATGGAAAGTGACAAGAAAATCCCTTCTCCGTTGGATGGTAGTGTTCAGAAAGGCAGGGCGTTGCATGGGAGGACTACTGGCCCTACCAGGCGTTCTACGAAAGGGCAATGGACAGCAGAGGAGGATGAGATTTTGTGCAAGGCTGTAGAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCCGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTGCATCGGTGGCAGAAAGTCTTAAATCCAGAGCTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGATTTGGTGAACAAATATGGTCCTAAAAAATGGTCTAATATCGCACAACATTTACCTGGGCGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCATGGACACAAGACGAGGAGTTGGCTCTGATACTTGCTCATGAAAAATACGGGAATAGATGGGCAGAACTAACAAAATATTTGCCTGGAAGGTCAGACAATGCTATAAAAAACCACTGGCACAGTTCTGTGAAAAAGAAATTGGATTCTTACAAGGCGTCAGGCTTGCTTGCTCGGTTACATTCTGCACCACTTATTGGTAATCCAAATCAACCCATAGCTTCAACTTCTTCAAGGTTGCAGTGTAGTGGAGATGAAAATGGTCCCAGGGGGACTGAAGCAAAGGAAGTTTCACAGTGTAACCAGGAGTCAGCTAATGCTGGTCAATTTCAATCTGCAACTGAAATGAGCAATGTTGTTTTTCAAACTAGAGAGGAATGCAGGCCAAATGAAGAATCTAGTGTAGGAAAGGATTATAGTCCTAGTGAAGCATCCTGTTCAGAACCGTATTATGTGTCTCTGGATGATGTTGAATTCAATGAGCAGAAATACTCACAAGAACCTGGAAATTTCACAAATGGGGATTGCCAGCTTAATTTATCTGCTTTAGCCAATATTTCCTCATTGGACTTTGTGAGGGAACCCTCAAGGTTGCAAAATGATTGTATAGCTCCAAGTGGAAGCCGGGACATGCTGATATCTAATGATGAATGCTGCCGATTGCTATTTCCAGAGGCAATGGGTGATGAATGCATTTCCTCTGGGGATAAAAAAGGTGTAAATATGGTTAACTTGTCTAGGTGCACTTCATTTACCTTCCAAACATCTTTACCATCTGCTGCTCCATCAGTATCTTCTGCTAGTGATGATAGGTTGTTATATACTGCTGAAGCCAATCAGTTAGTTGGATCTGAGGATCAGCAGTTTATCTGTGAGACATCTGCTCCATCAGTACCTTCTGCTGGTGAAGACAGCTTGCTGTTTACTGCCGAAACCAATCAGTTAGTTGGGTATGAGGATCAGCAGTTTGTCTCCAGAGCACAGGACAACTTCATTTTTGCCAATGACTTATCCGATGCTCCTTGTATCAATCAGATAGGTTGTTCAGAAATGCAAGAGCTATCAGATAATGTCCAGGAAACCTCAAAATTGGTCCCTGTAAATAGTTTTGGTTGTGGATCAGAAACTAAACAAACTTGCTATCCAACAGATGAAAAGCCAAACCTGGATACGAAACAGGACAACACAGGATCTCTATGCTATGAACCTCCCCGTTTTCCAAGTTTGGATATTCCTTTTTTAAGCTGTGATCTTACACAACCTGGGTGTGATATGCAGCAAGAGTTTAGTCCCCTAGGTATCCGCCAGTTGATGATGTCTTCTATGAACTGTCTATCACCTTTCAGGTTGTGGGACTCACCTTCTCGAAATGATAGTTCAGATGCTTTGTTGAAAAGTGCTGCTAAAACTTTCACAGGTACGCCATCCATATTAAAGAAAAGACACCGAGACCTTTTATCTCCGCTATCAGATAAAAGAATCGACAAGAAACTTGAGATTGACATGACGTCAACATTGATAAAAGATTTTTCCCGTTTGGAAGTAATGTTTGATGATATTGAGACTCCGGAAGCAGTTTTTCTTTCTCCATCTTCAATCCGAAAAAAGAATTCTGGTACCTCTGTTGAAGATGATAAAGAAAATTGTGGACAAACTGTTAAAGAGGAACCAATAAAGGAGAAAAATAAATCTGCAATATTGGATGACAAAATGTCAGAACTTGGTACAGGTGACGGTATTTCTCAGGAGAAGGGTACACAGCGATTTTCTGATGTTAAGTCTGGGATGAAAAATGATGTCAATGTGACTGCTGAGATTGTGCAACAATCTTCTGGAGTTCTGGTTGAACATGATATGAATAATCCATTACTGCATTCTCCTGATCTAGTTGGATTTAAATCAGACAGTGATCCAAGTTTATCCACTAGAACTCATAAAAGTCCTTGCTCGAGCATTAAGTCTCCTTATGGACAGGAAAGACTTAGAGTTGCTATTGCTAGTTGTGTACAATCCTTCTGTTCATCAGCCCCGGGAGAGAATTCGGATGTTCATGCTGGAAAAGATGCTGGTTTTGAAACATGTAGCATATTTGGTGGAACACCTTTTAGGAGAAGTGTTGAATCACCTACGACATGGAAATCACCTTGGCTCTTCAACACTTTTCTGTCTAGCCCCAAGATTGATCCTGAAATTACTATTGAGGATTTTGGGTATTTCATGAGCCCAGGTAATAGGAGTTATGATGCAATCGAATGGATGAAACAGATTAGTCCGATTGCTCGTGAGATTTTGGAAAATGAAACTCCTAAGGCGTTACCAAAAGATGGATCTGTAAATGACCAGGACAGGGACCAGGAAAATAAGGTTCCGCATGATCAGCATGAGAACCATTGTCAGTCGGCTTCAAATGCTTTGCTAAAGGTGGAGCGACGCATACTTGACTTCAGCGAATGTGGAACACCGGGCAAAGTTGATAACAGCAAATGCTCAACTATAAGCTGTTCAAGCCCTTCTTCTTCTTCTTCTTCATATTTGTTAAAAGGATGTAGATAG | 2970 | 0.4094 | MESDKKIPSPLDGSVQKGRALHGRTTGPTRRSTKGQWTAEEDEILCKAVERFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSNIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQDEELALILAHEKYGNRWAELTKYLPGRSDNAIKNHWHSSVKKKLDSYKASGLLARLHSAPLIGNPNQPIASTSSRLQCSGDENGPRGTEAKEVSQCNQESANAGQFQSATEMSNVVFQTREECRPNEESSVGKDYSPSEASCSEPYYVSLDDVEFNEQKYSQEPGNFTNGDCQLNLSALANISSLDFVREPSRLQNDCIAPSGSRDMLISNDECCRLLFPEAMGDECISSGDKKGVNMVNLSRCTSFTFQTSLPSAAPSVSSASDDRLLYTAEANQLVGSEDQQFICETSAPSVPSAGEDSLLFTAETNQLVGYEDQQFVSRAQDNFIFANDLSDAPCINQIGCSEMQELSDNVQETSKLVPVNSFGCGSETKQTCYPTDEKPNLDTKQDNTGSLCYEPPRFPSLDIPFLSCDLTQPGCDMQQEFSPLGIRQLMMSSMNCLSPFRLWDSPSRNDSSDALLKSAAKTFTGTPSILKKRHRDLLSPLSDKRIDKKLEIDMTSTLIKDFSRLEVMFDDIETPEAVFLSPSSIRKKNSGTSVEDDKENCGQTVKEEPIKEKNKSAILDDKMSELGTGDGISQEKGTQRFSDVKSGMKNDVNVTAEIVQQSSGVLVEHDMNNPLLHSPDLVGFKSDSDPSLSTRTHKSPCSSIKSPYGQERLRVAIASCVQSFCSSAPGENSDVHAGKDAGFETCSIFGGTPFRRSVESPTTWKSPWLFNTFLSSPKIDPEITIEDFGYFMSPGNRSYDAIEWMKQISPIAREILENETPKALPKDGSVNDQDRDQENKVPHDQHENHCQSASNALLKVERRILDFSECGTPGKVDNSKCSTISCSSPSSSSSSYLLKGCR | 989 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal4g0274 | 989 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 29 | 80 | IPR017930 | - | |
Lal4g0274 | 989 | Gene3D | - | 86 | 137 | - | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 961 | 989 | - | - | |
Lal4g0274 | 989 | Pfam | Myb-like DNA-binding domain | 138 | 180 | IPR001005 | - | |
Lal4g0274 | 989 | Pfam | Myb-like DNA-binding domain | 86 | 132 | IPR001005 | - | |
Lal4g0274 | 989 | Pfam | Myb-like DNA-binding domain | 34 | 80 | IPR001005 | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 915 | 934 | - | - | |
Lal4g0274 | 989 | ProSiteProfiles | Myb-like domain profile. | 29 | 80 | IPR001005 | - | |
Lal4g0274 | 989 | Gene3D | - | 139 | 198 | - | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Lal4g0274 | 989 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 137 | 187 | IPR017930 | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 207 | 252 | - | - | |
Lal4g0274 | 989 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 81 | 136 | IPR017930 | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 962 | 989 | - | - | |
Lal4g0274 | 989 | CDD | SANT | 140 | 180 | IPR001005 | - | |
Lal4g0274 | 989 | CDD | SANT | 37 | 80 | IPR001005 | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 207 | 224 | - | - | |
Lal4g0274 | 989 | SUPERFAMILY | Homeodomain-like | 35 | 90 | IPR009057 | - | |
Lal4g0274 | 989 | Gene3D | - | 33 | 85 | - | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 905 | 937 | - | - | |
Lal4g0274 | 989 | ProSiteProfiles | Myb-like domain profile. | 133 | 183 | IPR001005 | - | |
Lal4g0274 | 989 | SUPERFAMILY | Homeodomain-like | 83 | 179 | IPR009057 | - | |
Lal4g0274 | 989 | SMART | sant | 33 | 82 | IPR001005 | - | |
Lal4g0274 | 989 | SMART | sant | 85 | 134 | IPR001005 | - | |
Lal4g0274 | 989 | SMART | sant | 137 | 185 | IPR001005 | - | |
Lal4g0274 | 989 | CDD | SANT | 88 | 132 | IPR001005 | - | |
Lal4g0274 | 989 | PANTHER | TRANSCRIPTION REPRESSOR MYB5 | 10 | 351 | - | - | |
Lal4g0274 | 989 | PANTHER | TRANSCRIPTION REPRESSOR MYB5 | 350 | 988 | - | - | |
Lal4g0274 | 989 | PANTHER | MYB PROTEIN-RELATED | 10 | 351 | - | - | |
Lal4g0274 | 989 | PANTHER | MYB PROTEIN-RELATED | 350 | 988 | - | - | |
Lal4g0274 | 989 | MobiDBLite | consensus disorder prediction | 233 | 252 | - | - | |
Lal4g0274 | 989 | ProSiteProfiles | Myb-like domain profile. | 81 | 132 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal4g0274 | Lal-Chr4 | 1757014 | 1765373 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal4g0274 | 1 | 963 | MYB Transcription Factor Family | AT4G32730 | 43.385 | 0.0 | 685 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lal4g0274 | Myb_DNA-binding | 2e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal4g0274 | - | K09420 | gmx:100811335 | 1296.18 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal4g0274 | 4 | 1757014 | 1765373 | Lal4g0274 | 4 | 1757014 | 1765373 | ECH | |
Lal21g0405 | 21 | 2801484 | 2813229 | Lal4g0274 | 4 | 1757014 | 1765373 | LSH | |
Lal8g1513 | 8 | 19435167 | 19442813 | Lal4g0274 | 4 | 1757014 | 1765373 | PCT | |
Lal25g1110 | 25 | 14480383 | 14488224 | Lal4g0274 | 4 | 1757014 | 1765373 | PCT | |
Lal4g0274 | 4 | 1757014 | 1765373 | Lal8g1513 | 8 | 19435167 | 19442813 | PCT | |
Lal4g0274 | 4 | 1757014 | 1765373 | Lal25g1110 | 25 | 14480383 | 14488224 | PCT |