Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0265 ATGACACATTTTTTGCTACATAAGGAAAAGGAAGCAATGATGAAGGAAGGGATGGATAAAGAAATTGAAGGGGTTCATGGAAAGGAGGAAACCCTACCACCTGGATTTCGATTTCATCCCACTGATGAAGAACTCATCATTTGCTATCTCATGAATAAGATATCAGATTCTAGTTTTACAGGTAGAGCAGTAACAGATGTAGATCTTAACAAATGTGAACCATGGGAGCTACCAGGGAAGGCGAAAATGGGAGAAAAAGAATGGTACTTCTTTAGTCTGAGAGATCGTAAGTACCCTACAGGTGTGAGAACTAATAGAGCTACAAACACTGGGTATTGGAAGACAACAGGGAAAGACAAAGAGATCCTTAACAGTGTTACATCTGAGTTGGTTGGTATGAAGAAGACTCTTGTTTTCTATAAAGGTAGAGCTCCCAGAGGAGAAAAAACTAACTGGGTCATGCATGAATACCGTATTCACTCAAAATCTACCTTCAGAAATACCAAGCAGGATGAATGGGTGGTGTGTAGGGTATTCCAGAAGAGTGCTGGTATAAAAAAATACCCTACTTCCAACCATGCAAGGGCACTAGTGAATCCTTATAGCCTTGAAATAGGACCCAGTATGGTTCCACAACCAATGATACAACTTGGAGATCCTTCTTCTCATTTCCTCTATGGAAGAAATTACATGAACAATGCTGAATTGGCTGAAGTTGCTAGGGTATTTAGAGGGACTAGTGGATCAACCAGTGCTACCAATGTGAACCTACCAATGCAATCACAGTTTAATTATCCAGGAGGAGGAGGATTCACCATTTCAGGGCTTAACTTGAATCTTGGAGGAAGAGGAGGAGGAGGAGCTATGACACAATCTATGTTCAGGCAAATGCAACCACCGCCGCCGCCGCCCCCGACAATGACTCAAGTGCATGATGTAAGTTCCAACATGATGATGGCAGGAACAACTTGTGTTGGTGCAGAGAATATAGTTGGTTATGGTGCTTCAGAAATGAACAACACAAATCCACATGGGAATAGGTTTGTGGGCATGGACCATTGCATGGATCTTGAAAATTACTGGCCTGGTTCCTACTAA 1098 0.4208 MTHFLLHKEKEAMMKEGMDKEIEGVHGKEETLPPGFRFHPTDEELIICYLMNKISDSSFTGRAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTFRNTKQDEWVVCRVFQKSAGIKKYPTSNHARALVNPYSLEIGPSMVPQPMIQLGDPSSHFLYGRNYMNNAELAEVARVFRGTSGSTSATNVNLPMQSQFNYPGGGGFTISGLNLNLGGRGGGGAMTQSMFRQMQPPPPPPPTMTQVHDVSSNMMMAGTTCVGAENIVGYGASEMNNTNPHGNRFVGMDHCMDLENYWPGSY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0265 365 SUPERFAMILY NAC domain 29 181 IPR036093 GO:0003677|GO:0006355
Lal4g0265 365 Pfam No apical meristem (NAM) protein 33 159 IPR003441 GO:0003677|GO:0006355
Lal4g0265 365 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 360 - -
Lal4g0265 365 Gene3D NAC domain 41 185 IPR036093 GO:0003677|GO:0006355
Lal4g0265 365 ProSiteProfiles NAC domain profile. 32 181 IPR003441 GO:0003677|GO:0006355
Lal4g0265 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0265 Lal-Chr4 1719079 1721621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0265 28 363 NAC Transcription Factor Family AT2G24430 52.941 1.70e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal4g0265 NAM 7.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0265 - - gmx:100805060 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0265 4 1719079 1721621 Lal4g0265 4 1719079 1721621 ECH
Lal21g0395 21 2691676 2694248 Lal4g0265 4 1719079 1721621 LSH