Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0261 ATGAGGTTTGCACTAAGGACAAAAAGCTTTGGTTTTGGAGAAGAATGTGTTGTTGCAAATCACTGGTGGGATGAGATTGATGAATCAGATCAATGGCAAAGAGGCATTTACTACGCCCTTTGTGCTACTTATGCCTCAGTTTCCTCAAGGGATCCTGGTACTAGTGGAAATGGTTTGGGAAGTACAATTACACTTCGTCATCCCAAATCAGGAAATGCAACACAGTATCTCTATGTAAATGGGGTACTTCAAGAATTCCAATGGTTTAAGAACTTATATGGATCATGGTTTTTGGGAGATTATGTTAGTGAAGATGGTCGATTGTATTTATTCACACCGGTTGATCCTGTTTTCATCATGTTGCCCACATTTGAGAAAGCTAGAATGAAGAAAGGGGATGATCCTGGGAAGTTCAGGCAATTAGATGAGATCTTGTTTATTGATGGGTATCCTGGTTATCAGCAACTAACATCCATTGCAGAGAACTATATGCAAGTAGTTTGTGAAGTCAAAGAGATTAAGTCTGCCCTCTTCTCTCCTTGTACATATGCAGAAATGGAATCCTTAAAATTTTTTAGGCTTGATGACTCAAAGGTTCTACATTGGCTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTATCCAAATTGGACAAAAACTATGCTGCCCAAGAAGAGAAAGACACATTGGTTGATGCAGTTTCTATATTAGGAGAGTATTTGAAAGAAGAGCCTTGGTTGCGGCTTTTGTGTAACCATCTTAAGTTAAGTAAACTTGAAGTTACTGGAAAATCACAAGGAAGTGCTGAAGGAAGCAACTCAGGTTTTTCTAATGAAATACAGGAGAAGAGTGACGATAAGAAGGCTCCAATTGCTAAGAAGGGTAGACAAGCAAAGAAGAATTTTTGGAATTTAAGAAAAATCAAAAGATGCCCTTGCACAGAATCTGAATTACTATTGTCTATAGGTTTCAAGAGAGCTGAATATCTGTTACTCTATGCAGTTCCAATGGCAGGGCTTGATTTTGAAGCCAAATATGGTGATAGCCATGATATTCGGAAGACATTTGCCGATGAAGGTGTTAAGTTCCTTTTATCTCGTGAAGGGAAGGTACCCTTATCAGAATGCAATGGGAAGATGATTTGCCTATTTTTCTCCGCAAACTGGTGCAGACCTTGCAGAGGATTCATCCCCCATCTGGTTGAACTTTATGACGCACTGAGAAAGAGAGGCATAAATCTAGAGATCATATTTGTCTCCTTTGATCGCGAGGAGGATGGATTTAAAGAACATTTGAAGAGTATGCCATGGCTAGCCGTCCCGTTTGATATAAACTTGCATAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCGTTCATTCCATTATGTTCAAATGACATAGCTGTTGAAGAAGACTTGATTGGTTGCATTGAGGATTATGGTGCCAATGCATTTCCTTTCACAAAGAAGAGACATGATGAATTGAAAGCCATAGATAAAAGGAAACGCGAAGAAGCAAACTTGGAAGAATTATTGGCACAGGAAGGATGCAACTTTCTCATCTCTGGAGATGATAAAAAGGTACTTGTATCTGAATTAGCAGGTAAAACTGTAGGCCTATATTTTTCGGCCAACTGGTCTCCTCCTTGCCGTTCCTTCACTGTCCAACTCACCGATGTATACAACGTTCTCAATGCGGCAAAAGATCATTGCTTTGAGATTGTTTTAATCTCAACAGATAGAGATCTTAAGGAGTTCAATGTCAGCAGAAATAGTATGCCATGGCTTGCTATCCCTTATGAGGATAGAACTAGGCATGATCTTTGTAGAATCTACAACATAAAAGGAATTCCAGCTTTGGTTCTCATTGGACCAGATGGCAAAGTCATTAGCGAGAATGGTAAGTTTGTGATCTCCTCATATGGTGCCGAGGCTTTCCCTTTTACCGAGTCGCGGATAAGGGACCTAGAAGCAGCTCTGAGAAAGCAAGGAGAGGCTTTGTCTAAACAGGTTGAGGATATCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAATCAAGGGAAGTTCTGGGCTTTCTCTTGTGATGTCTGTGACTATGATCTTCATCCAAGTTGTGTAGAAAAAGTTAACAAAGACTAA 2178 0.3976 MRFALRTKSFGFGEECVVANHWWDEIDESDQWQRGIYYALCATYASVSSRDPGTSGNGLGSTITLRHPKSGNATQYLYVNGVLQEFQWFKNLYGSWFLGDYVSEDGRLYLFTPVDPVFIMLPTFEKARMKKGDDPGKFRQLDEILFIDGYPGYQQLTSIAENYMQVVCEVKEIKSALFSPCTYAEMESLKFFRLDDSKVLHWLCYKVCQLKQTLSKLDKNYAAQEEKDTLVDAVSILGEYLKEEPWLRLLCNHLKLSKLEVTGKSQGSAEGSNSGFSNEIQEKSDDKKAPIAKKGRQAKKNFWNLRKIKRCPCTESELLLSIGFKRAEYLLLYAVPMAGLDFEAKYGDSHDIRKTFADEGVKFLLSREGKVPLSECNGKMICLFFSANWCRPCRGFIPHLVELYDALRKRGINLEIIFVSFDREEDGFKEHLKSMPWLAVPFDINLHRRLIDRYQVDRIPSFIPLCSNDIAVEEDLIGCIEDYGANAFPFTKKRHDELKAIDKRKREEANLEELLAQEGCNFLISGDDKKVLVSELAGKTVGLYFSANWSPPCRSFTVQLTDVYNVLNAAKDHCFEIVLISTDRDLKEFNVSRNSMPWLAIPYEDRTRHDLCRIYNIKGIPALVLIGPDGKVISENGKFVISSYGAEAFPFTESRIRDLEAALRKQGEALSKQVEDIKHEHVLKLDMAKAYVCDSCKNQGKFWAFSCDVCDYDLHPSCVEKVNKD 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0261 725 ProSiteProfiles Thioredoxin domain profile. 513 661 IPR013766 -
Lal4g0261 725 SUPERFAMILY Thioredoxin-like 369 472 IPR036249 -
Lal4g0261 725 SUPERFAMILY Cysteine-rich domain 677 720 IPR046349 -
Lal4g0261 725 CDD TryX_like_TryX_NRX 521 651 IPR045870 GO:0004791
Lal4g0261 725 SUPERFAMILY Thioredoxin-like 524 634 IPR036249 -
Lal4g0261 725 CDD RNase_H2-B 54 212 IPR040456 GO:0032299
Lal4g0261 725 Pfam C1 domain 678 719 IPR004146 -
Lal4g0261 725 MobiDBLite consensus disorder prediction 264 279 - -
Lal4g0261 725 Pfam Ydr279p protein triple barrel domain 62 115 IPR041195 -
Lal4g0261 725 Coils Coil 497 517 - -
Lal4g0261 725 ProSiteProfiles Thioredoxin domain profile. 329 506 IPR013766 -
Lal4g0261 725 Gene3D - 46 113 - -
Lal4g0261 725 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 118 221 IPR019024 -
Lal4g0261 725 Gene3D - 114 255 - -
Lal4g0261 725 Gene3D Glutaredoxin 357 494 - -
Lal4g0261 725 Gene3D Glutaredoxin 516 653 - -
Lal4g0261 725 Pfam Thioredoxin-like 538 632 IPR012336 -
Lal4g0261 725 Pfam Thioredoxin-like 378 463 IPR012336 -
Lal4g0261 725 MobiDBLite consensus disorder prediction 264 295 - -
Lal4g0261 725 PANTHER THIOREDOXIN 337 722 - -
Lal4g0261 725 PANTHER NUCLEOREDOXIN 3-RELATED 337 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0261 Lal-Chr4 1686869 1697549 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0261 K17609 - gmx:100778160 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0387 21 2630406 2640105 Lal4g0261 4 1686869 1697549 LSH