Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0260 ATGTGGTTACCAAAGAATAATACTGAGATAAAGGATGGTGTGAATGGATTTGTAGCAGTTGCAGTAGATAAAGAAAAAGGGAGCCAAAATGCACTTAAATGGGCCATTGATCTTCTCCTAAATAGAAGTTCAATAGTGTTTCTTATCCATGTCAAACTTAAGCCAACTTTGCTTTCTCCATCACCTTCTCTTTATAGCCAAAGGTCAGGGGCAAATAGTGGTGATGAGGGTTCAGTAGGAAGAACAGACCCTGATGTCCTTAACAAAAAGGGACCAAACATGATTGTAGAAATGACGAAAACAACCATTTTAGAATGTTACAATCTCTGTGTTTTGATCTTTTGTTTTGTTTTGGTGGATGGACCACAGATACAATGCAAGGATGTGCTACTAGAAAATGTAGATGTATTCAAAGCTTTGATTGAATATGTTTCTAACACAGGAATTCAGCATCTGGTTCTTGGCTCCTTAACCAAAACTGATATTCCGGGAACAATATCAAAAGGCGCACCAGATTTTTGTACAGTCTATGTAGTTTCTAAAGGAAAGATTCATTCAATGCGATCTGCTACTCGTTCTGCTCCAGTTGTTCCTACTATCCTTAGCCAGGTCAGTGAAGCTAGTGTCGGGTCAGAACCATCGGAACCACATCTTCCAGTGGCTGCAGTTAGTGTGAAAGATCATATGCAGAAAGTTCGATTCCAGATAGTGATATCCTTTGTAAGCTCCGGAAGGCCTAGTGTAGATTGTATGTTCCCTTCGTTATATAGCAACTCGGATACAACTATGTCCAACTCTCGACTATCATATAGCTCAGACGTCGATGTAAACAATAGCTTTGAATCAATGCATTACGAAAGGAGGTCGATGGAAGTTGGCACTCATCCAGAATTTTCATCTGTATCATTTGAAAGTGATAAGAATTCAGGTTCTACATCACAAGCCATGGCCGTAGAACTTCAACGTTGGAAATTAGAGGAAGAGAGACGATTAGAAGAGGCAAGGCTCGCCGAGGAAGCTGCATTGGTTATTGCAGAAAAGGAAAGGGCCAAATCTAGAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCCGAACTAGAAGCACATAAGAGACTTAATGCAGAAATGAAAGCCCTTAAAGAAGCAGAAGCCAAAAAAAGAGCACTTGATTCTTTAGGAAACGTAGATGTCAGGTACTCAATCGAGGATATTGAAGCTGCGACAGAGTTTTTCGCAGAATCCTTAAAGATCGGAGAAGGAGGTTATGGTCCAGTTTTTAAGTGCCTTCTGGACCATACACCTGTTGCAGTGAAGGTTTTGCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTAAGCTGCATAAGGCATCCAAATATGGTTCTCCTCCTAGGAGCATGTCCAGAATATGGGTGCCTTGTGTATGAGTACATGGCTAATGGAAGCTTGGATGATCGACTATTTCGTCGCAGCAACACTCCTTCACTTCCCTGGCAGGTCAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGTTGTTCCTTCACCAAACAAAACCGGAACCTTTAGTGATGTTGGTTTGGCAAGGCTAG 1617 0.4193 MWLPKNNTEIKDGVNGFVAVAVDKEKGSQNALKWAIDLLLNRSSIVFLIHVKLKPTLLSPSPSLYSQRSGANSGDEGSVGRTDPDVLNKKGPNMIVEMTKTTILECYNLCVLIFCFVLVDGPQIQCKDVLLENVDVFKALIEYVSNTGIQHLVLGSLTKTDIPGTISKGAPDFCTVYVVSKGKIHSMRSATRSAPVVPTILSQVSEASVGSEPSEPHLPVAAVSVKDHMQKVRFQIVISFVSSGRPSVDCMFPSLYSNSDTTMSNSRLSYSSDVDVNNSFESMHYERRSMEVGTHPEFSSVSFESDKNSGSTSQAMAVELQRWKLEEERRLEEARLAEEAALVIAEKERAKSRAAIEAAEAQKRIAELEAHKRLNAEMKALKEAEAKKRALDSLGNVDVRYSIEDIEAATEFFAESLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRSNTPSLPWQVRFKIAAEIGTGLLFLHQTKPEPLVMLVWQG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0260 538 Gene3D Transferase(Phosphotransferase) domain 1 390 536 - -
Lal4g0260 538 PANTHER OS02G0152300 PROTEIN 220 316 - -
Lal4g0260 538 PANTHER OS02G0152300 PROTEIN 314 532 - -
Lal4g0260 538 PANTHER OS02G0152300 PROTEIN 5 221 - -
Lal4g0260 538 Gene3D HUPs 18 170 IPR014729 -
Lal4g0260 538 CDD STK_N 18 182 - -
Lal4g0260 538 MobiDBLite consensus disorder prediction 62 85 - -
Lal4g0260 538 Coils Coil 342 394 - -
Lal4g0260 538 SMART tyrkin_6 413 538 IPR020635 GO:0004713|GO:0006468
Lal4g0260 538 SUPERFAMILY Protein kinase-like (PK-like) 399 524 IPR011009 -
Lal4g0260 538 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 220 316 - -
Lal4g0260 538 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 221 - -
Lal4g0260 538 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 314 532 - -
Lal4g0260 538 Pfam Protein tyrosine and serine/threonine kinase 418 526 IPR001245 GO:0004672|GO:0006468
Lal4g0260 538 ProSiteProfiles Protein kinase domain profile. 413 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0260 538 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0260 Lal-Chr4 1681666 1685428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0260 1 532 Receptor kinase-like Gene Family AT1G78940 44.878 1.33e-131 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal4g0260 PK_Tyr_Ser-Thr 4.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0260 - - gmx:100803461 551.206