Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0228 ATGGCTGTGGGAAGCATGGGGTTGGGAAAACCATTCAGGGGAATAATTCAAGATTTCAAAGGAAGAGCTGCATGTTATAAACAAGATTGGGCTTGTGCAGTTTCTGGTGTTAGCATATTAGCACCAACATTCTATATATTCTTTGCTTCTGCTCTCCCAGTTATTGCTTTTGGAGAGCAACTTAGTAGAGATACAGATGGAACCTTGAGTACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAATTATACACTCAATAGTTGGTGGCCAACCTTTATTGATTTTAGGAGTTGCAGAACCCACTGTTATAATGTACACTTACCTCTACAGTTTCAGCAAAAATACCCCTGGACTTGGTCCCAAGATGTTTTTGCCTTGGGCTGGTTGGGTGTGCATTTGGACATCACTGTTTTTGATACTACTTGCAATTTTTAATGCATGCAATGTTATCACTAGGTTTACTAGAATTGCTGAGGAGTTATTTGGCATGCTTATTACTGTTCTGTTTTTCCAAGAAGCTATAAAGGGAGTGATAGAGGAGTTCAAGACCCCCAAGTCTGAAAATCCTCTGTCAGAGGAGTTTCAGTTTCAATGGCGGTATGCGAATGGATTACTTGCAGTCATTTTCTCTTTAGGATTAATTGCTGCTTCCCTTAAAAGCAGAAGAGCAAGAACATGGCGATATGGAACAGGGTGGCTACGAGGTTTTATTGCAGATTATGGATGTCCATTGATGGTGGTGTTTTGGACTGCACTATCTTATGGTAAACCAGGAAAAGTTCCACATGGTGTTCCTAGAAGGTTGTTTTGTCCACTTCCTTGGGAACCTGCTTCTCTCTATCATTGGACAGTAATCAAGGACATGATGAAGGTACCTGTGATTTATATATTGGCAGCAATTCTTCCAGCATTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTGGCTTCCAAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAGCCATCTGCATACCACTATGATTTGTTACTGCTTGGAATAATGACACTAATTTGTGGGGTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGCCAGATTATTCGAAAAAAGGTGGTAGAAAGTGCCAAGGAATGCATTAAGCAACAAAGGACTAAATCTGAAATGTATGGAAAGATAGAAGCTATATTTATAGAAATGGATACAGACCCTACAGATAAAGAGTTGCAGACTTTGAAGAAAGCTGTAATGGAATCTGATAGCAAGGATGGTGAAAAGGAAAATTTTGATCCTGAGAAGAACATAGATGAATATCTACCGGTTCGAGTTAATGAGCAAAGAGTGAGCAACTTATTGCAGGCCCTCATGATTGGTGGAGCAATTTTAGGCACGTCTGTTATTAAAATGATACCTACTTCAGTTCTATGGGGATATTTTGCATACATGGCAATCGATAGTCTCCCCGGGAATCAGTTCTGGGAACGAATACTACTTCTCTTCATCACCCCAAGTCGGCGTTACAAAGTTTTGGAAGGTTACCATGCTTCATTTGTGGAGACAGTGCCATTCAAGACCATATCTGCATTCACAGGCTTACAATTAGCATATTTTCTTTTGTGTTTTGGGGTAACACATATACCTATAGGTGGAATATTGTTTCCATTACCATTCTTCCTTCTCATAGTTCTTAGAGAAAAATTGCTTCCAAAGCTATTCAACTCTAGGCATCTTCAAGAACTAGATGCTGCAGAATATGAGGAAATTGTTGGTGCTCCAGATGCAGCACTTAATATGAAGAAAAGTTTAAAGCTGAAGGAGAAGCAACCACTTGTTGGTGACACCGATGATAACTCGGAAGAAGATTACTTTGATGCAGAAAAATTAGATGAAATGACAACAAGAAGGGGAGAGTTGAAACTTAGAAGCTTCAATGATAGTAACCGCATTCGTAGCAGAAAGAGTTTCAACTATGACCAACACATACAGGGTAAGTTGGATAATAAGAACATGGAGGAATTGCAGAATGCATTTACAGAACTAAGGCTTAAAAAAAATGAAATAGAAGTAGCAGCAATGAAGGAAAATATGGAGCTAAAAGGGACTATTGAGAATCTTGGTGCTATAAATGGGTTATTGGAAGATGGAATACGTGCATTTGAAGAGAAATATACAAATTTGAGTTTACGTGTTGCTAGATTGGAGCAAGAACGCATGGAACTTTTAAGGAGGGTGGCAACAATTAATGATGCTGCTTCATGA 2292 0.3935 MAVGSMGLGKPFRGIIQDFKGRAACYKQDWACAVSGVSILAPTFYIFFASALPVIAFGEQLSRDTDGTLSTVETLASTAICGIIHSIVGGQPLLILGVAEPTVIMYTYLYSFSKNTPGLGPKMFLPWAGWVCIWTSLFLILLAIFNACNVITRFTRIAEELFGMLITVLFFQEAIKGVIEEFKTPKSENPLSEEFQFQWRYANGLLAVIFSLGLIAASLKSRRARTWRYGTGWLRGFIADYGCPLMVVFWTALSYGKPGKVPHGVPRRLFCPLPWEPASLYHWTVIKDMMKVPVIYILAAILPALMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDLLLLGIMTLICGVLGLPPSNGVLPQSPMHTKSLAVLRSQIIRKKVVESAKECIKQQRTKSEMYGKIEAIFIEMDTDPTDKELQTLKKAVMESDSKDGEKENFDPEKNIDEYLPVRVNEQRVSNLLQALMIGGAILGTSVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKVLEGYHASFVETVPFKTISAFTGLQLAYFLLCFGVTHIPIGGILFPLPFFLLIVLREKLLPKLFNSRHLQELDAAEYEEIVGAPDAALNMKKSLKLKEKQPLVGDTDDNSEEDYFDAEKLDEMTTRRGELKLRSFNDSNRIRSRKSFNYDQHIQGKLDNKNMEELQNAFTELRLKKNEIEVAAMKENMELKGTIENLGAINGLLEDGIRAFEEKYTNLSLRVARLEQERMELLRRVATINDAAS 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0228 763 PANTHER ANION EXCHANGE PROTEIN 8 673 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal4g0228 763 Coils Coil 727 761 - -
Lal4g0228 763 Gene3D Helical hairpin bin 22 63 - -
Lal4g0228 763 Pfam HCO3- transporter family 452 542 IPR011531 GO:0006820|GO:0016021
Lal4g0228 763 Pfam HCO3- transporter family 11 186 IPR011531 GO:0006820|GO:0016021
Lal4g0228 763 Pfam HCO3- transporter family 199 377 IPR011531 GO:0006820|GO:0016021
Lal4g0228 763 PANTHER BORON TRANSPORTER-LIKE PROTEIN 8 673 - -
Lal4g0228 763 Coils Coil 681 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0228 Lal-Chr4 1433880 1439178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0228 7 655 Antiporters AT4G32510 65.244 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0228 K24194 - gmx:100787412 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0228 4 1433880 1439178 Lal4g0228 4 1433880 1439178 ECH