Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0225 ATGGCGAAGAAGAAGAATCCCCTAGTGTTCATGGATGTGTGCATCGATGGGGATCCATCTGAAAGGATAGTTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGTGGTCCCTGTTACCATTGTTTATGCTGTAGGATACAGGGATGATGGCCACGACTGCTTTTCTTATGATGGTGGTGATTTTGTCAATCGAAACGGGACTGGTGGAGAAAGCATATATGGCTCAAATTTCCCAGATGAGTCATCTAGGCTAAAGCACGATGCTCCAGGCCTTCTATCCATGGCAATTTCTGATCGTGATACTCTCGGTTCTCACTTCATTATCACTTTGAAAGCTGATCATAGCCTTGATAGGAAGCATGTGGTATTTGGGAAGATTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCGTCCAACTGTAACAGTTAAAATAGTTAATTGTGGTGAACATGCTGAGACAAGGCGGAAGGGAAAGCACAAAAAATCATCAAAAGATAGAAGGAAAAGGAGAAGAAGATACTACTCATCTGAATCGGAGAGTTCTTCAGATTCAGACGTGGACTCGTCGGAAACTGATAGTGATTCTGAGTCAGATTTGTCCTCATCATCTGACATAAGTTCTTCAAGCGATGACAGGCGAAGGAAGAGAAAGAGATCTAGGAAAGACAAGCGTAAACGTGGAAAAAGGGATAAACGCCACAACAAGAGGCGAAGGAGACGAAATAAGAGATCAAAGCGTAGATCAAGAAGGGAACTGGGCAGTGATTCAGATAGTGAAAGTAACAGGGACAGTAGCTCTGGTGATAAAAACCTTGATGCTCAAGGGAAAGAGCAGAAACGTAAAGATCATTGTCATAAAAATGTAGCTGAAGTTCAGTCTCCCTTAGTTGTGGATAAAGATAATCGTAAAAAGGATGGGGAAGGAGATATGCTGGAGAATGAGAAAGAACTTCCAAAGGAAAAAGGAAATCTGCTTACTAATGGCATTGAAGCAGACTATAAATCTGACCGAACTGAAGAGAGGCAGCCTGACGTGATGGATGATCATTCAGGCAAATCTAGGAGTCAAAGCTTGAGTCCTAAGCGACCCATGAGTAAGAGTACCAGTCCCAGGAGGAGTCAGAGCAAGAGCCCAAGTGTTACTCCAAAAAAGAGGATTAGCAGAGGTCCAACTGGTAGTAGAAGCCCCTCTCCATCAAGGAGGAGTGTGAGCAGAAGTCCTGTCAGGAGCATCAGCAGAAGTCCAAGCAGAAACATCAGTAGAAGCCCAGTAAGGGGCAGGAAGGGAGGAAGTGTGAGTAGAAGCCCTGTAAGAGGCGGGAAGCGGAAAAGTGTCCATAGAAGCCCAGTGAGGGGTGGGAAGGGTAGAAGTTTCAGTAGAAGCCCAGTGAGAAGTTGGAAGGGGAGAAGTGTCAGTAGAAGCCCTGTGGGAACTCCTCTTAGACGTGTCAGCAAGAGCCCTGTAAGATCCCACTCTCGAAGCTGCAGGAGTTCTCCCAGAGGATCATCACGAAAATCAATCAGCAGAAGTCCAGTTAAAGTATCAAGAAAGAGCGTGAGCAGGAGTCCAGTTAGATCATCTGCGAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCACCAAGGAGAAACATTAGCCGAAGTCCTGTCATAGCACCAAGCAGGAGCAATCGCTGCAGTTACTCTAGGAGTCCTAGCCCTGTTCGTAGGAGAAGGACACCTCGTGGGAGGAGTGTGTCGAGGAGTGTTTCACCTGCTGCTTCGCCAAAGCGTGTCAGAAGGGGAAGAGGTTTTAGTGAACGATACTCTTATGCAAGAAGGTACAATACCCCCTCTTGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAGACCGTGACAGATATTCTAGTTACAGAAGGTATTCCCCTAGGCGTTACAGGAACTCATCACCACATGGAAGAACTCCTCCAAGGTACCGAAGCAGGAAGAGCAGGACACCATCTGTTTCACCCAGCCCACGGTACCATGGTCGACGATATAGCCGAAGCCGTAGCCCAGCCCGTAGTGGTTCCCCGGTTCGCAGTCGTTCCCCAATTGAGCCATATCGATATCATCCATCTCCTCGTGTGGAGAGGCAATTCTCATCTTCTCGGAGCAAGAGTCCATCAAAATCCAGGTCTCCCATGGAATCACGATCTGCACCAAAAGCAAGCAGAGACAACAGGTCAAGGTCATCGTCTAGAGGCCCGGATGGAAGAAAAGGCCTGGTCTCGTATGGAGATGTTTCTCCCTACTCTGGTGAAAGGTGA 2343 0.4695 MAKKKNPLVFMDVCIDGDPSERIVFELFYDVAPKTAENFRALCTVVPVTIVYAVGYRDDGHDCFSYDGGDFVNRNGTGGESIYGSNFPDESSRLKHDAPGLLSMAISDRDTLGSHFIITLKADHSLDRKHVVFGKIVQGHNILKKIEDVGDEEGRPTVTVKIVNCGEHAETRRKGKHKKSSKDRRKRRRRYYSSESESSSDSDVDSSETDSDSESDLSSSSDISSSSDDRRRKRKRSRKDKRKRGKRDKRHNKRRRRRNKRSKRRSRRELGSDSDSESNRDSSSGDKNLDAQGKEQKRKDHCHKNVAEVQSPLVVDKDNRKKDGEGDMLENEKELPKEKGNLLTNGIEADYKSDRTEERQPDVMDDHSGKSRSQSLSPKRPMSKSTSPRRSQSKSPSVTPKKRISRGPTGSRSPSPSRRSVSRSPVRSISRSPSRNISRSPVRGRKGGSVSRSPVRGGKRKSVHRSPVRGGKGRSFSRSPVRSWKGRSVSRSPVGTPLRRVSKSPVRSHSRSCRSSPRGSSRKSISRSPVKVSRKSVSRSPVRSSARSLSRSSGRVPPRRNISRSPVIAPSRSNRCSYSRSPSPVRRRRTPRGRSVSRSVSPAASPKRVRRGRGFSERYSYARRYNTPSWSPVRSYRYNGRDRDRYSSYRRYSPRRYRNSSPHGRTPPRYRSRKSRTPSVSPSPRYHGRRYSRSRSPARSGSPVRSRSPIEPYRYHPSPRVERQFSSSRSKSPSKSRSPMESRSAPKASRDNRSRSSSRGPDGRKGLVSYGDVSPYSGER 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0225 780 MobiDBLite consensus disorder prediction 628 780 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 566 584 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 721 743 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 744 760 - -
Lal4g0225 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lal4g0225 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 115 IPR002130 GO:0000413|GO:0003755
Lal4g0225 780 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 143 IPR002130 GO:0000413|GO:0003755
Lal4g0225 780 MobiDBLite consensus disorder prediction 374 439 - -
Lal4g0225 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 169 - -
Lal4g0225 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 167 411 - -
Lal4g0225 780 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 167 IPR002130 GO:0000413|GO:0003755
Lal4g0225 780 MobiDBLite consensus disorder prediction 231 265 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 637 651 - -
Lal4g0225 780 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 166 IPR002130 GO:0000413|GO:0003755
Lal4g0225 780 MobiDBLite consensus disorder prediction 266 306 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 172 189 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 314 339 - -
Lal4g0225 780 Gene3D - 1 175 IPR029000 -
Lal4g0225 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 169 - -
Lal4g0225 780 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 167 411 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 350 373 - -
Lal4g0225 780 SUPERFAMILY Cyclophilin-like 4 168 IPR029000 -
Lal4g0225 780 MobiDBLite consensus disorder prediction 508 559 - -
Lal4g0225 780 MobiDBLite consensus disorder prediction 164 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0225 Lal-Chr4 1416318 1423623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0225 25 163 U-box Gene Family AT5G67530 38.356 3.27e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0225 K09566 - qsu:112027169 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0225 4 1416318 1423623 Lal4g0225 4 1416318 1423623 ECH