Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0205 ATGTCAGAGCTGAAAACAGCTTTTCGTGGCTTCATATTAGTCTATATCTTGATCCTTTTCACGGGTAAGTTTGTTGCTGGGAAAACAATGGGCACTGACAAACAAGTTCTGTTGAAGCTGAAATCTTATTTGGAAAATCAAACTCTTGCAGATCGAGGAGGATACAGAAGATGGAACAGCACCAGCTCAAATCCTTGTGAATGGTCAGGAATCTTGTGCAGCCTTCTGAACGGGACTACATGGAGGGTTGTAGGTGTAGACCTCAAAGCCAGTGGCATAGCTGGTGAGATATTCAATAATTTTTCTCAGCTCACTGAGCTCACACACCTTGACTTATCTAGGAACACCCTCTCTGGGGTGATTCCTAACGACTTGAGGATGTGCCAGAAGCTTGTGTATCTTAATCTCTCTCATAATATTCTTGACGGGGGACTCAATTTGACTGGCTTGACACGCTTGCGGACACTAGACTTGTCTGTTAATAGAATTCTTGGCCAAGTTGGGTTGAATTTTCCTGCCATTTGTGATAGTTTAGTCACTTTGAATGTTTCAGACAATGGCTTTACGGGTGGAATCGATAGCTGTTTTGATCAATGCCACAGATTGCAGTACTTAGATTTGAGCACTAACAAATTGAGTGGGGTCTTATGGGCTGGATTTGCCAGACTGAAACAGTTTTCAGTTTCAGAGAACTATCTGAGTGGTGTTATTCCTTCTCAAGCTTTTTCAGAGAATTGTAGCCTTGAAAAACTTGACCTTTCAGTAAATGGGTTTGGTGGTAAAGCCCCCAAGGAGGTTGCTAGCTGCAAGAATTTAGTGATCCTGGATCTTTCTAATAACAATTTTACTGGAGAGATTCCCCATGAAATTGGATCGATTTCTAGTCTTCGGTCATTGTTCTTGGGGAATAACAGTTTTTCAAGACATATTCCAGAGACCCTTTTGAATTTGACCAAATTGTTTATCTTGGACGTGAGCAGAAATCGATTTGGTGGGGAGATACAGAAGATTTTTGGAAAGTTCAAGCAATTGAAGTTTCTTGTACTGCACTCAAATTCTTATACTGGAGGGTTAAACACATCAGGCATTCCTAGGTTGACAAACCTTTGTCGCTTAGACCTAAGCTTCAATAACTTAACAGGTCTACTATCTCCTGAAATCTCTCAAATGACAGGTCTCATGTTCTTATCATTAACCTACAACCAGTTCACTGGACCTATTCCATCTGAGTTGGGAAAATTGACTGGCCTGCAAGCACTTGACCTTGCCTTCAATAGGTTCAGTGGGCCAATCCCACCGAGCCTTGGAAACTTAAGTTCTCTTTTATGGCTAATGCTTGCAGATAATTCATTAACTGGAGAAATCCCACCTGAGTTGGGAAACTGCACAAGCTTGTTATGGTTAAACCTTGCAAACAACAAGCTCTCTGGAAATTTGACTCCAGAGTTGACAAAAATTGGAAGAAATGCCATGGCCACATTTGAGTCAAATAAAAGAAGTATTTATAAAGTAGCTGGCAATAGTGAATGTTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCATTCAGCTTTGTGTACACCATTCTCACAAGGAAGAATTGTAGAAGCCTTTGGGACAGGTTGCTAAAAGGATATGGTATTTTCCAAGTTTGTGCATCCGGGTCCTCTTTTAGACCCAACATATCTGGGTATGTTCAGCTAAGTGGGAACCACCTCACTGGTGAAATTCCTCCAGAAATTGGGAACATGCAGAACATTAGTATATTGCATTTGGGGCATAACAATTTCACTGGGAAGTTACCTCCAGAGATGGGAAGTTTGCCACTTGTAGTCTTGAACATGACTCAAAACAAGTTTTCAGGAGAAATTCCATGGGAAATTGGCAACTTGTTATGTCTGGAGGCTCTGGATTTGTCTTTCAACAATTTCTCCGGAATGTTTCCTACAAGTCTGGCCAACTTGGTTGGGCTTAGCAGATTCAACATTTCATATAATCCCTTGATATCTGGAGTAGTGCCATCAACCGGACAATTTGTTACTTTTGACACAGATTCATATTTTGGTGACACCATATTGAACTTTCCAAAGTTCATTGATAATACCATAGATGATAAAAATAAGAGCACTCACATAGACTTGAAAAGATGCACAAAATTGCCTCTCCTGTTTGTGATTTTGGCTCTCACATTGGCAATCTCGGTCTTTGGACTTCTTTTCCTTATAGTATTTTTCTTGGTGAAATGTCCGTCATCGGTGGAACCAGGATACCAATTGAAGAATGATACATCACCATGGTTGAGTGATACTGTTAAGGTATTCCACTTGAACAAGATAGTTTTCACACACGCTGACATTCTAGAAGCAACAGGAAACTTCAGAGAGGAGAGAGTAATAGGAAAAGGTGGCTATGGAACAGTGTACAAAGGTGTGTTTCCAGATGGGAAAGAAGTGGCAGTGAAGATCCTCCGAAAGGAAGGAATTGAAGGTGAAAAGGAATTCAGAACTGAAATGGAGGTTCTGAGTAGTCAAGGCTTTGGTTGGCTTCATCCAAACCTTGTCACACTCTACGGCTGGTGCCTATACGGTTCACAAAAAATACTAGTTTATGAGTACATGGGAGGTGGTAGTTTAGAGGATATTGTGACAGATAGAACAATGTTGACGCGGAAGTGGCGCCTAGAAGTGTCAATTGACGTGGCTCGGGCGCTAGTCTATTTACACCATGAATGCTACCCATGTATTGTGCACAGAGATGTGAAGGCTAGTAATGTGTTGCTTGATAATGATGGGAATGCTAAAGTTACAGACTTTGGACTAGCTAGAGTTTTAGATGCTGGAAATAGCCATGTGAGCACAATTGTGGCTGGCACGGTGGGATATGTTGCACCTGAATATGGACAGACATGGCAAGCCACCACCAAAGGGGATGTGTACAGTTTTGGGGTGCTGGCTATGGAGCTAGCAACGGGGAGGAGAGCGGTCGATGGAGCGGAAGAGTGTCTCGTGGAATGGGCGAGGCGTGTCACGGGCTCTGGACTAGTTCAGGAGGATGCAGAGGAGATTGATGAACTGCTACAAATTGGTGTGAAGTGCACAAATGATTCACCACAGGCTAGGCCTACCATGAAGGAGGTTTTGGCTATGCTCACTATGATATAA 3165 0.4221 MSELKTAFRGFILVYILILFTGKFVAGKTMGTDKQVLLKLKSYLENQTLADRGGYRRWNSTSSNPCEWSGILCSLLNGTTWRVVGVDLKASGIAGEIFNNFSQLTELTHLDLSRNTLSGVIPNDLRMCQKLVYLNLSHNILDGGLNLTGLTRLRTLDLSVNRILGQVGLNFPAICDSLVTLNVSDNGFTGGIDSCFDQCHRLQYLDLSTNKLSGVLWAGFARLKQFSVSENYLSGVIPSQAFSENCSLEKLDLSVNGFGGKAPKEVASCKNLVILDLSNNNFTGEIPHEIGSISSLRSLFLGNNSFSRHIPETLLNLTKLFILDVSRNRFGGEIQKIFGKFKQLKFLVLHSNSYTGGLNTSGIPRLTNLCRLDLSFNNLTGLLSPEISQMTGLMFLSLTYNQFTGPIPSELGKLTGLQALDLAFNRFSGPIPPSLGNLSSLLWLMLADNSLTGEIPPELGNCTSLLWLNLANNKLSGNLTPELTKIGRNAMATFESNKRSIYKVAGNSECLAMKRWIPADYPPFSFVYTILTRKNCRSLWDRLLKGYGIFQVCASGSSFRPNISGYVQLSGNHLTGEIPPEIGNMQNISILHLGHNNFTGKLPPEMGSLPLVVLNMTQNKFSGEIPWEIGNLLCLEALDLSFNNFSGMFPTSLANLVGLSRFNISYNPLISGVVPSTGQFVTFDTDSYFGDTILNFPKFIDNTIDDKNKSTHIDLKRCTKLPLLFVILALTLAISVFGLLFLIVFFLVKCPSSVEPGYQLKNDTSPWLSDTVKVFHLNKIVFTHADILEATGNFREERVIGKGGYGTVYKGVFPDGKEVAVKILRKEGIEGEKEFRTEMEVLSSQGFGWLHPNLVTLYGWCLYGSQKILVYEYMGGGSLEDIVTDRTMLTRKWRLEVSIDVARALVYLHHECYPCIVHRDVKASNVLLDNDGNAKVTDFGLARVLDAGNSHVSTIVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGAEECLVEWARRVTGSGLVQEDAEEIDELLQIGVKCTNDSPQARPTMKEVLAMLTMI 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0205 1054 PRINTS Leucine-rich repeat signature 107 120 - -
Lal4g0205 1054 PRINTS Leucine-rich repeat signature 150 163 - -
Lal4g0205 1054 Pfam Leucine Rich repeat 245 260 IPR001611 GO:0005515
Lal4g0205 1054 Gene3D Ribonuclease Inhibitor 333 519 IPR032675 -
Lal4g0205 1054 Gene3D Ribonuclease Inhibitor 171 243 IPR032675 -
Lal4g0205 1054 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1052 - -
Lal4g0205 1054 SUPERFAMILY Protein kinase-like (PK-like) 775 1052 IPR011009 -
Lal4g0205 1054 SMART LRR_typ_2 438 462 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 632 655 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 585 609 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 414 437 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 293 317 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 366 390 IPR003591 -
Lal4g0205 1054 SMART LRR_typ_2 104 127 IPR003591 -
Lal4g0205 1054 Gene3D Phosphorylase Kinase; domain 1 758 873 - -
Lal4g0205 1054 SUPERFAMILY L domain-like 93 479 - -
Lal4g0205 1054 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lal4g0205 1054 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1052 - -
Lal4g0205 1054 Pfam Leucine rich repeat 101 139 IPR001611 GO:0005515
Lal4g0205 1054 ProSitePatterns Protein kinases ATP-binding region signature. 800 822 IPR017441 GO:0005524
Lal4g0205 1054 Pfam Protein kinase domain 794 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0205 1054 Gene3D Ribonuclease Inhibitor 29 170 IPR032675 -
Lal4g0205 1054 SMART serkin_6 794 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0205 1054 Gene3D Transferase(Phosphotransferase) domain 1 874 1054 - -
Lal4g0205 1054 CDD STKc_IRAK 800 1052 - -
Lal4g0205 1054 Gene3D Ribonuclease Inhibitor 564 711 IPR032675 -
Lal4g0205 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Lal4g0205 1054 SUPERFAMILY L domain-like 566 718 - -
Lal4g0205 1054 ProSiteProfiles Protein kinase domain profile. 794 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0205 1054 Gene3D Ribonuclease Inhibitor 244 332 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0205 Lal-Chr4 1274205 1278514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0205 11 1051 Receptor kinase-like Gene Family AT1G55610 31.011 1.37e-141 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lal4g0205 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0205 - - gmx:100813425 1446.8