Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0184 ATGATGAGTTCTAAAAAGAGTAAATGGAAGTCAATTATCTTCATCTTAAGTTGTGGCAAAATAAAATGCACCTTGGAGGAATCAGAAAAACAAGGTTCTTTCCAAAAGCTATGTTTCTCAGATATAAGCCTTTCTAGCTCTATTGAAGAACTTTCCATTTCCCTCGTTGGTTCAAGGCTTTACACATTCAGTTTAGAGGAGCTAAGAGAAGCAACACATAATTTTTCATGGAGTAATCATATTGGTGAAGGTGGATTTGGACCTGTGCACAAAGGTTTTGTTGATGACAAACTTAGGCATGGCTTGAAGGCTCAGCTTGTGGCTGTGAAACAATTGGACTTGGATGGCATGCAAGGTCACAGAGAATGGCTGGCAGAGATTATATTTCTTGGGCAGCTAAGGCATCCACATCTTGTGAAGTTAATTGGGTACTGTTGTGAAGATGAGCATAGGCTTTTGGTGTATGAATACATGGCTAGAGGCAGCTTGGAGAATCAACTCTTCACAAGATACTCTGCTGCCATGCCGTGGTCATCGAGGATGAAAATTGCGTTGGGTGCGGCGAAGGGTCTTGCCTTCCTTCATGAAGAAGATAAGCATGTAATATACAGGGATTTCAAAGCATCAAATATCTTACTAGACTCAGATTACACAGCTAAACTATCAGACTTTGGGCTAGCTAAGGATGGACTTGAAGGGGAAGACACACGTGTAACAACGAGAATAATGGGAACACATGGCTATGCCGCTCCCGAGTACATCATGACAGGCCACCTTACTACAAAGAGTGATGTGTATAGCTATGGCGTTGTTATGCTGGAATTGCTTACAGGAAAAAGGGTAGTGGGTAAGTCAAGCTCCCACGGACAACGAAGCCTGGTGGAATGGGCAAGACCGCTATTGAGAGATCAAGGAAAGTTGCAGCTTATCATAGACCCGAGATTGGAAGGGCAGTTTCCTATTAAAGGAGCTATAAAGGTTGCTGCATTGACTTATAAATGCTTGAGCCAACACCCAAATCCAAGGCCACCTATGAGTGATGCGGTCAAGATATTAGAGTCACTTCAGGATTTTGATGATGAGTTCATTGGACCAGTTGTGTATGTAGCAGTAAGTGAAACTAGCCACTGA 1131 0.4262 MMSSKKSKWKSIIFILSCGKIKCTLEESEKQGSFQKLCFSDISLSSSIEELSISLVGSRLYTFSLEELREATHNFSWSNHIGEGGFGPVHKGFVDDKLRHGLKAQLVAVKQLDLDGMQGHREWLAEIIFLGQLRHPHLVKLIGYCCEDEHRLLVYEYMARGSLENQLFTRYSAAMPWSSRMKIALGAAKGLAFLHEEDKHVIYRDFKASNILLDSDYTAKLSDFGLAKDGLEGEDTRVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVMLELLTGKRVVGKSSSHGQRSLVEWARPLLRDQGKLQLIIDPRLEGQFPIKGAIKVAALTYKCLSQHPNPRPPMSDAVKILESLQDFDDEFIGPVVYVAVSETSH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0184 376 PANTHER KINASE 1B 19 375 - -
Lal4g0184 376 SUPERFAMILY Protein kinase-like (PK-like) 49 354 IPR011009 -
Lal4g0184 376 ProSiteProfiles Protein kinase domain profile. 75 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g0184 376 PANTHER OS01G0588500 PROTEIN-RELATED 19 375 - -
Lal4g0184 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lal4g0184 376 Gene3D Transferase(Phosphotransferase) domain 1 158 363 - -
Lal4g0184 376 Gene3D Phosphorylase Kinase; domain 1 39 157 - -
Lal4g0184 376 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0184 Lal-Chr4 1152221 1154492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0184 62 352 Glycoside Hydrolase AT3G07070 50.680 7.11e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal4g0184 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0184 - - gmx:100802636 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0184 4 1152221 1154492 Lal4g0184 4 1152221 1154492 ECH
Lal19g1193 19 15348507 15351211 Lal4g0184 4 1152221 1154492 ECH
Lal17g1494 17 16375334 16382295 Lal4g0184 4 1152221 1154492 ECH
Lal18g0113 18 906732 909570 Lal4g0184 4 1152221 1154492 ECH
Lal17g0175 17 1063852 1071060 Lal4g0184 4 1152221 1154492 LSH