Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0177 ATGAGTTTAAGCACAACCAAGGATGATTCTTCTTCTTCTTCTTCTTCTTCAGAGGTTCACATCCCTGCAGAGATAGATTGGCACATGCTTGATAAGTCCAAGTTTTTCTTCCTAGGCGCCGCCTTATTCTCTGGTGTCTCAGCTGCTCTTTATCCCATGGTTGTGTTGAAGACACGTCAGCAATGTTCTTCAGCACAATACTCTTGTGTCAACATGTCTTGTGCCATCATGCGCTATGAAGGATTCAAAGGGTTTTATAAAGGTTTTGGAACTTCTTTGATGGGAACAATCCCTGCTCGTGCACTTTACATGGCTTCACTTGAAGTTACCAAGAGTAATGTTGGCACTGCTCTTGTTGATTATGGGTTTTCTGATACCACTGCCACTGCTATAGCTAATGCTGCTGCTGGTGTCACTTCTGCTATGGCTGCACAATTGGTTTGGACACCAATTGATGTTGTGAGCCAAAGACTTATGGTCCAAGGCTGCAATAGTACCACCAACACTAAAAATATAGTAACTAATCTTAACCCTGAGAGGTATAGGAATGGCTTTGATGCATTCAGGAAAATTCTATGTGCTGATGGAGCAAGAGGGTTCTATAGGGGATTTGGTATTTCAATATTGACTTATGCACCATCCAATGCAGTTTGGTGGACTTCTTACTCTATGGTCCATAGGCTCATTTGGGGTGCTTTTGGTAGCTACATGGGTAAAAACAATGAGGGTAATTTGGTCAATGGAGGGTGTGGTTTTAGGCCTGATTCCAAGACAATGGTGGCTGTGCAAGGGTTGAGTGCTGTTATGGCAAGTGGGGTATCAGCAATTGTGACAATGCCATTTGACACAATCAAGACAAGGTTGCAAGTGTTGGATAATGAGGAAAGTGGGAGAAGGAAGCCTTTAACTTTTATGCAAACTGTGAAGAATTTGGTGAATGAAGGTGGTTTGCATGCTTGTTACAGAGGATTGGGACCAAGGTGGGTTTCAATGTCAATGTCTGCAACAACCATGATTACAACCTATGAGTTTTTGAAACGCATGTCTACTAAGAGTAAAGAGTAA 1065 0.4235 MSLSTTKDDSSSSSSSSEVHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQCSSAQYSCVNMSCAIMRYEGFKGFYKGFGTSLMGTIPARALYMASLEVTKSNVGTALVDYGFSDTTATAIANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCNSTTNTKNIVTNLNPERYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMGKNNEGNLVNGGCGFRPDSKTMVAVQGLSAVMASGVSAIVTMPFDTIKTRLQVLDNEESGRRKPLTFMQTVKNLVNEGGLHACYRGLGPRWVSMSMSATTMITTYEFLKRMSTKSKE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0177 354 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 354 - -
Lal4g0177 354 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 354 - -
Lal4g0177 354 SUPERFAMILY Mitochondrial carrier 28 345 IPR023395 -
Lal4g0177 354 Gene3D Mitochondrial carrier domain 175 354 IPR023395 -
Lal4g0177 354 Gene3D Mitochondrial carrier domain 3 174 IPR023395 -
Lal4g0177 354 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Lal4g0177 354 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085
Lal4g0177 354 PRINTS Mitochondrial carrier protein signature 267 289 IPR002067 GO:0055085
Lal4g0177 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 113 IPR018108 -
Lal4g0177 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 348 IPR018108 -
Lal4g0177 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 228 IPR018108 -
Lal4g0177 354 Pfam Mitochondrial carrier protein 44 113 IPR018108 -
Lal4g0177 354 Pfam Mitochondrial carrier protein 129 230 IPR018108 -
Lal4g0177 354 Pfam Mitochondrial carrier protein 260 352 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0177 Lal-Chr4 1113979 1115043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0177 2 354 Chloroplast and Mitochondria Gene Families AT5G26200 65.537 5.42e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0177 K15121 - gmx:100784202 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0177 4 1113979 1115043 Lal4g0177 4 1113979 1115043 ECH
Lal17g0164 17 998888 1001731 Lal4g0177 4 1113979 1115043 LSH