Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0173 ATGCCTTTAAAAGTAGCTGATTTAGTGTGTGATAAGTCAACCATAGCTGCACACATGGATGTATCCAGACTTAAGATGTTGACAGATACAGGGTTTTTATCTAATTCTATAACCAAGTTTTCTTCCGAGACAGTTTTAGGTTCTGGCGAGGATCATAATAATGGTTGCAATATGAACGGTGAACTTGGTATTGCGGCAGTCACACTTGTGCCATCAAAACAGGGAGGAGAAATAAAAGTTCCTTTCTTGGATATGATATCCCAAAATAAAGGCACGTTGGTTGTTAGCGATGAAGTTTTAACACCAGAAACTGAGGATGATTTGTTTTCATTGGAAGGTGATCCAACTCCAATTATTGATATCTCTTGTTCTTTTTCAGTAGCCAGTGAGAACAGTAGCATATGTAGAGGTAAGTTGGTCACTTATGAGGCTACTGCAGATTTAGAGATATCGAGTTCCTTTGACATAGAGAAGAACAGCTGTGCTGTTAGTGTTGTTGCCAGAGCTGCTAATTTGGCAGAGTCGAATGATATGGCAGATATTATGACTGAACCCCTAGCTGTAGCAGTGACCCTTGAAGAAGAAACTAGAATTAGATCTGCTCCAAATCCTACTGCAGTTGTTCTTCATCAGCTACCTCTGGAAAAAGGGGTGAATGGAACAGTTGGTCGGAGTGTTTTTGAATTGGAGTGGACCCCACTTTGGGGATTTACATCTGTGTGTGGAAAAAGACCTGAGATGGAAGACGCAGTTGCCGTTGTACCTCGGTTTTCGAAAATTCCTATTCAAATGCTCATTGGTGATAGGGTAATTGATGGAATGAACAAGTGCTTCAGTCAGCAGACAACTCATTCCTTTGGAGTCTATGATGGTCATGGCGGCTCTCAGGTGGCAAACTATTGTCGTGATCGAGTACATTTGGCCTTGGCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATAGTTGGAAATACCAAGGAAGATTGTCAAGATCAGTGGAAAAAAGCTTTCACTAATTGTTTTTTAAAGGTTGATGCTGAAGTTGGGGGGAAAGCTAGTTGTGAACTTGTTGCCCCTGAAACTGTTGGATCCACTGCTGTTGTTGCTATCATATGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTCCTCTGTCGTGGTAAAGAACCCATGGCATTATCTGTCGATCATAAACCGAATCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCTAGGTCCATAGGCGATAGATATCTGAAACCATGGATTATTCCAGAACCAGAAGTTACATTTCTTCCTCGTGCCAAAAACGATGAATGTCTGATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACAAATGAAGAAGCATGTGACATAGCTCGGAGACGAATACTTCTCTGGCACAAGAAAAATGGCTTGGCGCTGCCCTCAGTAAGGGGAGAGGAAATTGACCCGGCTGCACAATCAGCTGCTGAGTACCTATCAAATCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGACCAAAACATGA 1647 0.4183 MPLKVADLVCDKSTIAAHMDVSRLKMLTDTGFLSNSITKFSSETVLGSGEDHNNGCNMNGELGIAAVTLVPSKQGGEIKVPFLDMISQNKGTLVVSDEVLTPETEDDLFSLEGDPTPIIDISCSFSVASENSSICRGKLVTYEATADLEISSSFDIEKNSCAVSVVARAANLAESNDMADIMTEPLAVAVTLEEETRIRSAPNPTAVVLHQLPLEKGVNGTVGRSVFELEWTPLWGFTSVCGKRPEMEDAVAVVPRFSKIPIQMLIGDRVIDGMNKCFSQQTTHSFGVYDGHGGSQVANYCRDRVHLALAEEIEFVKEGLIVGNTKEDCQDQWKKAFTNCFLKVDAEVGGKASCELVAPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKNDECLILASDGLWDVMTNEEACDIARRRILLWHKKNGLALPSVRGEEIDPAAQSAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKTKT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0173 548 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 106 548 - -
Lal4g0173 548 CDD PP2Cc 236 538 IPR001932 -
Lal4g0173 548 PANTHER ALPHABET, ISOFORM E-RELATED 106 548 - -
Lal4g0173 548 Pfam Protein phosphatase 2C 256 531 IPR001932 -
Lal4g0173 548 SMART PP2C_4 224 536 IPR001932 -
Lal4g0173 548 SUPERFAMILY PP2C-like 226 539 IPR036457 -
Lal4g0173 548 ProSiteProfiles PPM-type phosphatase domain profile. 234 538 IPR001932 -
Lal4g0173 548 Gene3D - 221 548 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0173 Lal-Chr4 1096431 1100293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0173 205 548 PP2C-type Phosphatase Gene Family AT1G17550 65.449 1.67e-161 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0173 K14497 - gmx:102662702 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0173 4 1096431 1100293 Lal4g0173 4 1096431 1100293 ECH