Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0166 ATGGGTGCTTCTGGAAAATGGGTTAAAGCACTCATCGGACTCAACAAGCCTCACAAGGATGAACAAGTGAAAGAAGGTGGTAAGAATAAGAAGTGGAGGTTATGGAGGAGTTTTACTACTACAACTACAACTACATCTTCAGCTTCTATGGGTTCTTCGTGGAAAGGTTACAAAGGAAACCAGAGAGCAGAATCTGAAGAAGGAGGGTGTGATGACCTTTATACAGTGGCAGTGGCCACAGTGGTTCGAGCTCCTCCTAAGGATTTTAGACTTGTCAGACAAGAATGGGCTGCTATTCGAATCCAAACTACTTTCCGTGCCTTCTTGGCAAGAAGGGCATTGAGGGCATTGAAGGCAGTGGTGAGGATTCAAGCTCTTGTTCGGGGTAGACAGGTGAGAAAGCAGGCTGCAGTAACATTGAAGTGCATGCAGGCCTTAGTTCGAGTTCAAGCCAGAGTAAGAGCTCGCCGCGTTCGCATGTCCATAGAGGGACAAGCAGTCCAGAACATCCTTAATGAGAGACACACCAAGTCTGATCTATTGAAACAAGCAGAGGAAGGATGGTGTGACAGCACTGGAACATTGGAAGATGTTAAAGCAAAGATACAAATGCGGCAAGAAGGGGCTTTCAAGAGAGACAGAGCAATAGCATATGCTCTTGCTCAGAAGAAAGTGAGTTCAACACCAAGCTGTAATTCAAGAACAAATGCCACTGTTTCCTCTCTGAAGAATCGCGATATGGACAAAGCCAACGAGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCTTGGGAGAATAGATTAATGGAACAGTCCAATGCTGAAGGCTCATATAAAAGCAAAACCCCACCACCACCTCCGAAAAAATTTGTGGACTCCTTAGTAACATGCTCAAATTCTAAACCATCATCAGAACCATGCTCAGTCAAAGTGAAGAAGAACAATGTCACTACAAGGATTTCTGCTAGGCCTCCTCCCCTTGTTGGACAAGCTACACGTTCATCTTCAAGTCCAAGTTCTGAATTTCTTAATGATGAGAGTTCTCCATCATCTATTTGTACATATACAACACCAATCTCTGGGAACATTTGTAATAGGACTGTGGATAATTGTAACACTAGGCCAAGTTACATGAACCTGACTCAGTCAACCAAGGCAAAGCACAAAACAAACAATCAAATGTATAACAGATCTCAAAGGCAACAATCCATGGATGAGTTTCAGTTTCTCAAAAAAGCTGCATTTTTTTCCAATGGGGATTCCAAAAGCAAAGCTGGTTCTGACCATTCAATAAACTTTTCTAGGCCACTTTACCTACCAACTCAAACTCACTTGTATAAGGTCTCAACGAAGTCAAGGTGA 1368 0.4342 MGASGKWVKALIGLNKPHKDEQVKEGGKNKKWRLWRSFTTTTTTTSSASMGSSWKGYKGNQRAESEEGGCDDLYTVAVATVVRAPPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLKCMQALVRVQARVRARRVRMSIEGQAVQNILNERHTKSDLLKQAEEGWCDSTGTLEDVKAKIQMRQEGAFKRDRAIAYALAQKKVSSTPSCNSRTNATVSSLKNRDMDKANEGWSWLERWMAAKPWENRLMEQSNAEGSYKSKTPPPPPKKFVDSLVTCSNSKPSSEPCSVKVKKNNVTTRISARPPPLVGQATRSSSSPSSEFLNDESSPSSICTYTTPISGNICNRTVDNCNTRPSYMNLTQSTKAKHKTNNQMYNRSQRQQSMDEFQFLKKAAFFSNGDSKSKAGSDHSINFSRPLYLPTQTHLYKVSTKSR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0166 455 MobiDBLite consensus disorder prediction 274 293 - -
Lal4g0166 455 PANTHER IQ-DOMAIN 5-RELATED 1 446 - -
Lal4g0166 455 Pfam IQ calmodulin-binding motif 96 115 IPR000048 GO:0005515
Lal4g0166 455 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
Lal4g0166 455 Gene3D - 92 145 - -
Lal4g0166 455 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Lal4g0166 455 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 446 - -
Lal4g0166 455 MobiDBLite consensus disorder prediction 299 351 - -
Lal4g0166 455 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
Lal4g0166 455 MobiDBLite consensus disorder prediction 330 351 - -
Lal4g0166 455 MobiDBLite consensus disorder prediction 299 323 - -
Lal4g0166 455 SMART iq_5 116 137 IPR000048 GO:0005515
Lal4g0166 455 SMART iq_5 93 115 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0166 Lal-Chr4 1043279 1046007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0166 1 444 IQD Protein Family AT2G26180 57.238 3.47e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0166 - - gmx:100799714 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0166 4 1043279 1046007 Lal4g0166 4 1043279 1046007 ECH
Lal8g0836 8 6060496 6063456 Lal4g0166 4 1043279 1046007 PCT
Lal4g0166 4 1043279 1046007 Lal8g0836 8 6060496 6063456 PCT