Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0165 ATGACGAACTCAACCTGCGGAGGCTCCGGCATAAACATATGCCGTGATGAATCAGCAGCATTCCCTCTCAAATTCATTGCCATTGCTTCAATCCTCCTCTGTGGTTTCGTAGGAGTCGCTATCCCCTTGATCGGAAAACACACTCGATTCCTCAGAACAGATAGCAACCTTTTCTTAGCCACCAAGGCTTTCGCGGCGGGGGTAATTCTTGCCACAGGGTTTGTACACATGCTGTCAGACGCAACCGAAGCGCTCAATAACCCGTGCCTGCCTCCGTTTCCATGGTCAAAGTTTCCATTTACGGGGTTCTTCGCAATGGTGGCAGCGTTGTTAACGCTTCTTCTTGAAGTTGTTGGAACTCAGTATTTTGAGAGGCAGCAAGAGGTGAAGAGGGATACAAAGGATGAAATCCGAGAGGGGTTAATTGAAAAAGAGGAGAGTGGTGGAATGCACATAGTGGGGATGCATGCTCATACAGAGCATCATGTGCATAACCATTCTCATGGACAAGACGCTTGTAGCGGCGATAGGCAACATGATCATGGTCATGGACACGCACACTCGCATTTTCATGGTGCAGAGGATCAACTTCATGTCCGACACGTTGTCGTTTCGCAGGTATTGGAGCTTGGGATCGTATCACATTCAGTGATAATTGGGTTATCTCTTGGAGTTTCAAAAAGTCCTTGCACCATAAGACCTCTAATCGCCGCACTATCTTTTCATCAGTTCTTCGAAGGTTTTGCATTTGGAGGGTGCATCTCACAAGCAAAATTTATGAGCTCATCATCAGCAATAATGGCTTGTTTTTTTGGACTAACTACACCGTTGGGTATTGGTATTGGAATAGGCGTTGCTTCAGTGTATAATCCTTACAGTGCCGGGGCACTTATCACAGAAGGTATCCTGGACTCTTTTTCTGCAGGGATTTTAGTGGACTTGATATCTTCTGATTTTCATAGCAAAAATTGTAACTTCAGGTTGCAAATTCTTTCTTATTTTATGCTTTTCCTTGGGGCTGGATTGATGTCTTCCCTAGCAATCTGGGCGTGA 1053 0.4549 MTNSTCGGSGINICRDESAAFPLKFIAIASILLCGFVGVAIPLIGKHTRFLRTDSNLFLATKAFAAGVILATGFVHMLSDATEALNNPCLPPFPWSKFPFTGFFAMVAALLTLLLEVVGTQYFERQQEVKRDTKDEIREGLIEKEESGGMHIVGMHAHTEHHVHNHSHGQDACSGDRQHDHGHGHAHSHFHGAEDQLHVRHVVVSQVLELGIVSHSVIIGLSLGVSKSPCTIRPLIAALSFHQFFEGFAFGGCISQAKFMSSSSAIMACFFGLTTPLGIGIGIGVASVYNPYSAGALITEGILDSFSAGILVDLISSDFHSKNCNFRLQILSYFMLFLGAGLMSSLAIWA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0165 350 TIGRFAM zip: ZIP zinc/iron transport family 10 350 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lal4g0165 350 MobiDBLite consensus disorder prediction 165 189 - -
Lal4g0165 350 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 350 - -
Lal4g0165 350 PANTHER ZINC/IRON TRANSPORTER 1 350 - -
Lal4g0165 350 Pfam ZIP Zinc transporter 22 347 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0165 Lal-Chr4 1034090 1036947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0165 2 350 Inorganic Solute Cotransporters AT1G60960 63.802 1.70e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0165 K14709 - gmx:100812212 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0149 17 914375 921924 Lal4g0165 4 1034090 1036947 LSH
Lal8g0722 8 5141412 5147883 Lal4g0165 4 1034090 1036947 PCT
Lal25g1012 25 13393944 13397633 Lal4g0165 4 1034090 1036947 PCT
Lal4g0165 4 1034090 1036947 Lal8g0722 8 5141412 5147883 PCT
Lal4g0165 4 1034090 1036947 Lal25g1012 25 13393944 13397633 PCT